Methanosalsum zhilinae: Mzhil_0005
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Entry
Mzhil_0005 CDS
T01541
Name
(GenBank) peptide chain release factor 1
KO
K03265
peptide chain release factor subunit 1
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
Mzhil_0005
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzh03019
]
Mzhil_0005
03012 Translation factors [BR:
mzh03012
]
Mzhil_0005
Messenger RNA biogenesis [BR:
mzh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
Mzhil_0005
Translation factors [BR:
mzh03012
]
Eukaryotic type
Release factors
Mzhil_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
DNA_ligase_ZBD
Zn_ribbon_6
HypA
DUF7129
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AEH59886
UniProt:
F7XMG3
LinkDB
All DBs
Position
4946..6205
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AA seq
419 aa
AA seq
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MSEQSAHKKYEFKRKLEQLKSKKGRGTELVSLYIPPDKQISDVVSQLKVEHGQASNIKSK
VTRSNVQGALDSLLSRLKYLEEVPENGIIYFTGAVDVGANKTSMETTIIEPPQPIITYRY
HCDSRFYLEPLESMLKETKTYGLLVLDRREATIGLLVGKRIESYRHLTSTVPGKQRKGGQ
SAQRFQQLRLIAIHDFYKKVGEAANEVFMSVDMNDLAGVLIGGPSPTKEEFDSGEYLHHE
LEKKKVGLFDVAYTDESGLSELVNAASERLYDIDLMEEKRAMERFFTELISESEKAAYGE
ENVRKNLEIGSVEVLLISEDLRAEKTVIGCSSCGYEKKYTMQLRAGEMTSQSSDSIGNCP
ECGSPLEIKEKVDIVDELSDLADQMGTEVKFISTEFEEGSQLMNAFGGLAAILRFSTGI
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaacaatctgcacataaaaaatatgaatttaaaagaaaacttgaacaactgaag
agcaagaagggacggggtactgaactggtttccctttatattccaccagacaaacagata
tcagatgttgtatcccagcttaaagtggaacacggacaggcatcaaacatcaagtcaaag
gttacaagaagcaatgttcagggggcacttgattccctgttatcccgactgaagtatctg
gaagaggtacctgagaatggaataatatattttaccggtgctgtggatgtaggagcaaat
aagaccagcatggaaacaacaataattgaacccccccagccaattattacatacaggtat
cactgtgattcaaggttctaccttgaacctcttgagtcaatgcttaaagaaaccaagact
tacgggttactggttcttgatagacgtgaggccacaataggattgcttgttggaaagcgt
atagaatcataccgtcacctgacctccaccgttccaggtaaacagagaaaaggaggacag
agtgcacagagattccagcagctcaggcttattgccatacatgatttctacaagaaggtg
ggagaggctgctaacgaagtctttatgtcggtagatatgaatgatcttgcaggtgtactt
ataggaggaccatcgcctacaaaggaagaatttgattctggagagtacctgcatcatgaa
cttgaaaagaaaaaggtaggtctttttgatgttgcatatactgatgaatctggattgtcg
gaattggtcaatgcagccagtgaaagactctatgacattgatctgatggaagaaaaaagg
gctatggaaaggttctttacagagctgatatcagaatctgaaaaagcagcctatggagag
gaaaatgtaagaaagaaccttgaaataggttctgttgaggtccttctcatatctgaagat
ctaagagctgaaaaaacagttattggatgcagctcatgtggatatgaaaagaagtatacc
atgcagctaagggcaggtgagatgacatcacagagttctgattcaattgggaactgccct
gaatgtggttcaccgcttgagataaaagaaaaggttgatattgtggatgaactatcagat
ctggctgatcagatgggtacagaggtgaagttcatatccacggaatttgaagaaggttcc
cagcttatgaatgcctttggaggactggctgcaattttaaggtttagcacaggtatctga
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