Methanosalsum zhilinae: Mzhil_0023
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Entry
Mzhil_0023 CDS
T01541
Name
(GenBank) nucleic acid binding OB-fold tRNA/helicase-type
KO
K07466
replication factor A1
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03030
DNA replication
mzh03420
Nucleotide excision repair
mzh03430
Mismatch repair
mzh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Mzhil_0023
03420 Nucleotide excision repair
Mzhil_0023
03430 Mismatch repair
Mzhil_0023
03440 Homologous recombination
Mzhil_0023
03460 Fanconi anemia pathway
Mzhil_0023
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mzh03000
]
Mzhil_0023
03032 DNA replication proteins [BR:
mzh03032
]
Mzhil_0023
03400 DNA repair and recombination proteins [BR:
mzh03400
]
Mzhil_0023
Transcription factors [BR:
mzh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
Mzhil_0023
DNA replication proteins [BR:
mzh03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
Mzhil_0023
DNA repair and recombination proteins [BR:
mzh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
Mzhil_0023
MMR (mismatch excision repair)
Mzhil_0023
DSBR (double strand breaks repair)
HR (homologous recombination)
Mzhil_0023
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
CDC24_OB3
OB_Ssb-like
REPA_OB_2
SHLD2_OB1
OB_MEIOB_N
POT1PC
eRF1_1
Motif
Other DBs
NCBI-ProteinID:
AEH59904
UniProt:
F7XMI1
LinkDB
All DBs
Position
complement(23920..25053)
Genome browser
AA seq
377 aa
AA seq
DB search
MENMDEINSIYEKVSKVISRDEYIERVNEKVEQMSGLCDEKTAAMLVAHDLGASDAGQNT
VKIAEITPDSGIVNFIGKVISVFDSREFKRNDGTTGKVGNIVVGDETGTIRLTLWDDRAE
LINSGNIEIGQCLKISGYVKEGYTGLEVNIGDNNMISESDEMVDIKLSSTSISDIKDGMG
DINLYGKVLDKWDIREFNRRDGSKGRVCNILIGDSSGKIRLTLWDEKADFAEKIKAGDTV
EIINGYARENNFNQEVEIQIGSYGLIKKSDRNVEFRESFTPIADIVAGDLFSIKGHVSGI
DEIKEFSRQDGTQDMVANIYVSDETGRIRLALWGEHANTVNDIDIDSRIEVIDAYSKYGL
KDEIELNVGNRSKIIVM
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatatggacgaaatcaacagtatctacgaaaaggttagtaaagttatcagcagg
gatgaatatatagaaagggtaaatgaaaaggtagagcagatgagtggcctatgtgatgag
aagactgctgctatgcttgttgcacatgatctgggagcttctgatgcaggccagaataca
gtcaaaattgcagaaataacccctgatagtggtatcgtcaattttattggaaaagttatc
tcagtttttgacagcagagaattcaaaagaaatgatgggacaaccggcaaggtaggcaac
attgtcgttggcgatgaaacaggcaccatccggcttaccctctgggatgatcgtgcagaa
cttataaattcaggaaatattgaaatcggacaatgcctcaagatcagtggctatgtcaaa
gaagggtatacaggactggaagtgaacatcggggataataacatgatatcagaaagtgat
gagatggtcgatatcaaactgagttcaaccagcatcagtgatatcaaggacgggatgggg
gacattaacctttacggaaaagtcctggataaatgggatatacgagaattcaatcgcaga
gacgggtcaaagggacgtgtatgcaacatcctcataggtgacagcagtggaaagatacgt
ttgacactgtgggatgaaaaagccgattttgcagagaagataaaagcaggtgatactgta
gagataatcaatggatatgctcgggaaaacaacttcaatcaggaagttgaaatccagata
ggatcatatggattgatcaaaaagagtgatagaaatgtagaatttagagaaagttttact
ccgattgcagatattgttgcaggggacctattttcaataaaaggccatgtttctggaatt
gatgagataaaggagttcagccggcaggacggaactcaggatatggttgcaaatatctat
gtgtccgatgaaaccggcaggatccgccttgctctgtggggagagcatgcaaacactgta
aacgacatagatattgattccagaatagaggtaattgatgcttattccaagtatggtctc
aaagatgaaatcgaacttaatgtcggaaacagaagcaaaatcatagttatgtga
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integrated database retrieval system
