Methanosalsum zhilinae: Mzhil_0502
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Entry
Mzhil_0502 CDS
T01541
Name
(GenBank) RNA polymerase beta subunit
KO
K03045
DNA-directed RNA polymerase subunit B" [EC:
2.7.7.6
]
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Mzhil_0502
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzh03021
]
Mzhil_0502
Enzymes [BR:
mzh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Mzhil_0502
Transcription machinery [BR:
mzh03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
Mzhil_0502
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_1
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
Motif
Other DBs
NCBI-ProteinID:
AEH60373
UniProt:
F7XQ12
LinkDB
All DBs
Position
550316..551917
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AA seq
533 aa
AA seq
DB search
MIVQHHIDSYNKFVQVGLQKIIDEQGIIETDLEDIYLKLGKIRVEKPIVKEADGAIERLY
PNEARLRNLSYSAPLYLEMSVVKGETETEPQETKIGQLPVMIKSNICNLKELNDEEMVQS
GEDPLDPGGYFIVNGTERVVMTLEDLAPNKILAEFSERYGDSIEVAKVFSQRRGYRALVV
VERGRKALLEVSFPSISGRINFITLMRALGIETDEDIVNIVSTDPEIMKFMLENLEEAEV
GTREEAIEKIGSRVASGQATDYQIKRANYVIDRYLLPHLGNAPTDRIPKAHFLGRMAESC
FELALARRSEDDKDHYSNKRLKLTGDLMEDLFRVAFNRLSRDIKYQLERANMRNRELNVG
TLVRADVLTDRLQHPLATGNWVGGRTGVSQLLDRTDYISTLSHLRRVISPLSRAQPHFEA
RDLHPTQWGRLCPSETPEGPNCGLVKNFAQMVELSTGIEDITSIKNILYDLDVKPTQMNI
SVDDVPEYEEEPGNYTEELEKITHHDVDEKKHIGIEVYSGEKLDDTDSIGGDL
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
atgattgtacagcatcatatagactcatataataaatttgtacaggtgggtctgcaaaag
atcatcgacgaacaggggatcatagaaacagatcttgaagatatttatttaaaacttgga
aaaatccgggttgagaaacccattgtaaaagaagcagatggtgcaattgaaagactgtat
cccaacgaagcaaggttgcgaaatctatcctactctgcaccattatatcttgaaatgagt
gtggtcaaaggggagacagaaaccgaacctcaggaaaccaagatcggtcagttgccggta
atgatcaaatctaacatctgtaacctgaaagaactcaatgatgaggaaatggtgcaaagt
ggtgaagatccacttgatcctggaggatactttattgtaaacggaactgaaagggtggtc
atgacccttgaagaccttgcaccaaataaaatactggctgagtttagtgaaagatatggt
gattccatagaggttgcaaaggttttctcccagagacgtggatatcgtgcgcttgtggtt
gttgaaaggggacgaaaagcactgcttgaagtttcatttccttcgatatcgggacgaatc
aatttcataacacttatgcgagcacttggcattgaaacagatgaagatatagtgaatatt
gtttcaacagaccctgagattatgaaatttatgcttgaaaatctggaagaagcagaggtg
ggtaccagagaggaggccattgaaaaaatcggctcccgggtagcttcaggacaggcaact
gattatcagatcaagcgtgctaactatgttattgacagatatctccttccacaccttgga
aatgctcctactgaccggataccaaaagctcatttcctgggtagaatggcagaatcgtgc
tttgaacttgctcttgctagaagatctgaggatgataaagatcattattccaataagcgt
ctcaaactcacaggagatctcatggaggatctgttcagggtggcctttaatagactttca
agggacatcaaataccagcttgaaagagccaatatgaggaatcgtgagctgaacgtagga
actcttgtaagggcagatgttcttacagaccgtcttcagcatcctctggcaaccgggaac
tgggttggtggaagaaccggggtttcacagctactggacaggactgattatatttccacc
ctgtctcacctgaggcgtgtgatctctccactatcaagggcacagccacattttgaagcc
cgtgatctgcatccgacccagtggggtcgattatgtccatctgaaacaccagaaggccca
aattgtggtctggtaaagaattttgcgcagatggttgaattatctaccggtattgaggat
atcacatctatcaaaaatattctttatgatctggatgtaaaacccacacaaatgaatata
tcagtggatgatgttcctgaatatgaagaggagcctggtaattacaccgaagaacttgaa
aagatcacacatcatgatgttgatgaaaaaaagcatataggcattgaagtttattcgggt
gaaaaattagatgatactgacagtatcgggggggatttgtaa
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