Methanosalsum zhilinae: Mzhil_0632
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Entry
Mzhil_0632 CDS
T01541
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Mzhil_0632
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mzh03400
]
Mzhil_0632
DNA repair and recombination proteins [BR:
mzh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Mzhil_0632
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Mzhil_0632
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
RsgA_GTPase
AAA_23
AAA_22
nSTAND3
nSTAND1
AAA_18
APS_kinase
DnaJ_CXXCXGXG
Viral_helicase1
AAA_24
AAA_21
AAA_25
NTPase_1
cobW
Zn_Ribbon_TF
PRK
MeaB
Herpes_Helicase
T2SSE
ThiI
dNK
Motif
Other DBs
NCBI-ProteinID:
AEH60499
UniProt:
F7XQJ7
LinkDB
All DBs
Position
complement(681008..683845)
Genome browser
AA seq
945 aa
AA seq
DB search
MILVQIMSLNNIIIKGAKEHNLKNIDLNLPRDKLIVITGLSGSGKSSLAFDTIYAEGQRR
YVESLSAYARQFLGLMEKPDVEYIEGLSPAISIEQKTTSKNPRSTVGTVTEIYDYLRLLY
SRIGIRHCPDCGEMIEPQSIDQIVDNIKKIPEGTKIHILSPLVRERKGEYKKLISDILTE
GFSRVRIDGEVIPIEEALDVELGRYQKHNIEIVVDRLVIKEGIDERLADSVETAIEKSGG
TIIVHLLDDKELVFSEKLACPACGTGFEDLEPAAFSFNSPQGACQTCHGLGTSMEFDPEL
IVPDDSLSLRDGAIEPWSSRDGYHMQSLESLAKHYDFSMDVPYRELSKKVQNTIMYGTKK
KIPFLHVGRKGGLWKHTGRFKGVIANLSKIYDKTESESTKEKLNKYISTKPCSTCNGARL
KPTSLAVTLDSLNIIDVTKLSVQDCLHFFEHLELKLTSREFTIGRLILKEIKSRLGFLID
VGLDYLTLDRASATLSGGEAQRIRLATQIGSSLMGVLYILDEPSIGLHQRDNLRLINTLK
NLRDIGNTVLVVEHDEETILNADHVVDMGPGAGIHGGYIVAEGTPQQVIDDENSLTGKYL
KGEVSISVPEIRRTGNGTLTLEKAEENNLKNIDVSFPLSTMICITGVSGSGKSTLISETL
NKVLAQKLHGSREKPGKYGNIRGIENIDKVITIDQSPIGRTPRSNPATYTNLFTPIRELF
SQTQLARARGYKQGRFSFNVRGGRCEACSGDGIITIEMHFLPDVYVPCEVCHGKRYNRET
LEVTYKNKSIADVLDMTVEEALEFFEHIPKIERKLRTLFDVGLGYIKLGQASTTLSGGEA
QRVKLATELSKKSTGKTLYILDEPTTGLHFDDVKKLLQVLHRLVDSGNTVIVIEHNLDVI
KTADWIIDLGPEGGEKGGEVIAKGTPETIAVSEGSYTGEFLKRIL
NT seq
2838 nt
NT seq
+upstream
nt +downstream
nt
atgattctggtacagatcatgtctttaaacaatatcatcataaaaggtgccaaggagcac
aatctaaaaaatatcgacctcaatcttccacgagataaactaatagttataaccggattg
agtggatccggaaaatcatcacttgcttttgataccatctatgcagaaggtcagagaaga
tatgtagaatcattatctgcctatgcccgtcagttccttggactaatggaaaagcctgat
gttgaatacattgaagggctctcccctgcaatttcaatagagcaaaaaaccaccagcaag
aaccctagatccactgttgggactgttacagagatatatgattatttaaggcttctgtat
tcaagaataggaatacgccactgtccggactgtggcgagatgatcgagccacaaagtatt
gatcagatagttgataacataaaaaaaattccagaaggaaccaaaatccacattctctca
ccactggttcgcgaaagaaaaggagaatataagaagctgatcagtgatatcttaactgag
ggtttttcgagggtgcgaattgacggagaagtcattccaattgaagaggctttagatgtt
gaacttggccgctatcagaaacacaatatagagattgtggtggatagactggtcatcaaa
gaaggtattgatgaacgtctagcagattcggtagaaacggctatcgaaaaaagcggcgga
acgattatcgtacatctgctggatgataaagaactcgttttcagcgaaaaacttgcctgc
ccggcctgtggaaccggatttgaagaccttgaacctgctgcattctcatttaacagtcca
cagggtgcctgccagacatgccatggactgggtacgtctatggaatttgatcccgaattg
atagttcctgatgactcactcagcctgagagatggtgcaattgagccctggagttccaga
gatggataccacatgcagtcacttgaatcacttgcaaaacattacgatttttccatggat
gtcccgtaccgagaactcagtaaaaaagtccagaacacaattatgtatggaacaaaaaag
aaaatcccttttttacatgttgggagaaaaggcggactatggaaacatacaggtcggttt
aaaggagttatagcaaatctttcaaagatctatgataaaaccgaatctgaaagcacaaaa
gaaaagctgaataaatacataagtactaagccgtgcagtacctgtaatggtgcacgtcta
aagcccaccagtcttgcagtgacccttgacagcctcaatataatagatgtcactaaatta
tctgtgcaggattgccttcatttttttgagcatctggaattgaagcttacaagcagggaa
tttacaattggaagactgatattaaaagaaatcaaatccagacttggatttcttattgat
gtgggactggattatctcacacttgacagagcatctgcaaccctatctggaggagaagct
cagagaatacgtctggcaacacagatcggatccagtctcatgggagttctgtatattctg
gatgagccaagcataggtctgcatcaaagagacaacttgagactgataaatactctcaaa
aatctaagagatattggaaatacagttcttgttgtcgaacatgacgaagagaccatatta
aatgcggatcatgttgtggatatgggaccaggtgccggaatccatggaggatatattgtt
gcagagggtactcctcaacaggttattgacgatgaaaactcattgacaggaaaatatcta
aaaggagaggtcagtatcagtgttcctgaaattagaagaactggaaatggaacacttaca
ctggaaaaggctgaagagaataatctaaaaaacatagatgtaagttttccactgtcaaca
atgatatgtattacaggtgtttcaggttccggcaaaagtacccttataagtgaaacactc
aataaggtactggctcaaaaattgcatggctcaagagaaaaaccagggaaatatggaaat
ataaggggtattgaaaatattgataaggtaataactattgaccagtcgccaataggccgc
acaccccgttccaatcctgcaacctatacaaacttatttacgccaataagggaacttttt
tcacaaacacagctagccagagccagaggatataaacagggaaggttcagctttaatgtc
cgtggtgggcgctgtgaagcatgttctggtgacggaataataaccattgaaatgcatttt
ttaccggatgtatatgttccatgtgaagtatgccatggaaaaaggtacaatcgagaaaca
ttggaagtgacatacaagaataagtcaattgccgatgttctggatatgaccgttgaagaa
gcacttgaattttttgagcatattccaaaaattgaaagaaagctcagaaccttatttgat
gtcggtcttgggtatataaaactggggcaggcttcaaccaccctctcaggtggtgaagct
cagagagtaaagcttgccacggagcttagtaaaaaatccacaggaaaaacattgtacatt
ctggatgaaccaacaacaggcctccattttgatgatgtaaaaaaactacttcaggtctta
cacaggcttgtagattccggaaatacagttattgtaattgaacataatctggatgtcata
aagactgctgactggataatagatcttggacctgaaggaggagaaaaaggaggagaggtc
atcgccaaaggaacacctgaaactatcgcagtgtcagagggatcatataccggtgaattc
ctcaagcgcattctttga
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