Methanosalsum zhilinae: Mzhil_0700
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Entry
Mzhil_0700 CDS
T01541
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mzh
Methanosalsum zhilinae
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mzh03032
]
Mzhil_0700
03400 DNA repair and recombination proteins [BR:
mzh03400
]
Mzhil_0700
Enzymes [BR:
mzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Mzhil_0700
DNA replication proteins [BR:
mzh03032
]
Prokaryotic type
DNA Topoisomerases
Mzhil_0700
DNA repair and recombination proteins [BR:
mzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Mzhil_0700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
HHH_5
DUF4332
DNA_pol_lambd_f
RAD51D_N
SAM_BAF
AF1548-like_C
IMS_HHH
Cdd1
Toprim_2
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AEH60567
UniProt:
F7XKA0
LinkDB
All DBs
Position
complement(766088..768376)
Genome browser
AA seq
762 aa
AA seq
DB search
MHLIIAEKNIAAKRIASILAPKKPKQSRVNGVDTYQFKNKEETVVIGLSGHIVTVDFPPQ
YKNWQKVESRELIDAEIVTVATHSKIVSVLKKMAKKATNVTIATDYDREGELIGVEALNI
LKKANPDLKFDRVRYSAITPKEINDAFSNPVSIDFNLAAAGHSRQVIDLVWGASLTRYLS
LVSGRLGNMFLSVGRVQSPTLAIIVDREKERDEFVPKPYWEIDALLEDKNKNEVLASHSK
GRFWDKDEADTVMEKVNKARKAVVSQIRKSSKTDKPPTPFNTTELISAASSIGFTASNAM
RIAESLYTNGYISYPRTDNTVYPASLDLRAQIEIFSSGIFKEYANELLKKKELIPTRGKK
ESTDHPPIYPASYAKKSELNEQEWKLYELVVRRFFATFAEPARWETMRIKFEINEEEFKS
SGARLVNAGWRWYYPYNAPEDRLLPQMEEKDILSVEKIDMVDKETKPPGRYGQGRLIRLM
EELGLGTKATRHETISKLYSRTYVHGSPLIPTKTAYAVIETLEKYAPTITKPDMTSKLEQ
DMDKIAEGEITENDVIDESREMLQSIFSEFEKCQDKIAESLRAGLREDKIVGSCPECNSK
LSIRRSRRGSRFIGCSNYPDCTFSLPLPKSGQIIVTDKSCDEHGLYHLRIISKGRRPWNL
GCPQCNFLEWQKSQNNENQEKNEKVTSKNAHKKTVPASKKKSDKVTEISGIGKVTAEKLD
EAGIVKIGDLLNADATEISRKTNISVKKIKNWQKIAVPDRQN
NT seq
2289 nt
NT seq
+upstream
nt +downstream
nt
atgcatcttattattgcggaaaagaacattgctgcaaaaaggattgcctcaatacttgca
ccaaaaaaacccaagcagtcaagagttaatggtgtggatacctatcaattcaaaaataaa
gaagaaactgttgttataggattgagtgggcatattgttacagttgattttcctccgcaa
tataaaaactggcaaaaggttgagtcccgggaattgattgatgctgaaatagttacagtg
gcgacccattcaaaaattgtttctgttcttaaaaaaatggctaagaaagcaacaaatgta
acaattgctactgactatgatcgtgaaggtgagttgatcggtgttgaagccttaaatata
ctcaaaaaagcaaatccagatcttaaatttgaccgtgtaaggtacagtgcaattacccca
aaagaaataaacgacgcgttttcaaatccggtatcaattgatttcaatcttgctgcagca
ggacattcaaggcaggttatagatcttgtatggggagcatcgcttaccagatacctatct
cttgtttccggcagactcggaaatatgttcctgtctgttggaagagttcaatcacccacg
cttgccataattgtagatagagaaaaggaaagggacgagtttgttccaaagccatactgg
gaaatagatgccctgctggaagataaaaataaaaacgaagtcttagccagccattcaaag
ggaaggttctgggataaagacgaggcagataccgtaatggaaaaagtcaataaggccaga
aaagcagttgtatcccagatacgcaaatccagcaaaaccgataagccgccaactccattc
aatacaacagagctgatcagtgcagccagctcaatcggatttacagcttctaatgcaatg
cgcatcgccgagtctctttataccaatggttatatctcatatccaagaactgataatact
gtttatccagcttctctggatcttagagcacagatcgaaatattttcttcaggaatattt
aaagagtatgccaacgagcttcttaaaaagaaagagttgatcccaacccgtggtaaaaag
gaatctacagatcatcctccaatatacccagcttcatatgctaaaaaatcagagcttaat
gaacaggaatggaaattatacgaactggtggtcagaaggttctttgcaacatttgcagaa
cctgcccgctgggaaaccatgcgtatcaaatttgaaataaatgaagaggaattcaaatcc
agtggtgccagacttgtaaatgccggctggagatggtattatccatataatgctccagag
gacagattacttcctcaaatggaagaaaaagacatacttagtgttgaaaaaattgatatg
gtggataaagaaacaaagccccctggaaggtatggacagggaagactgatacgtttaatg
gaagaattggggctgggaacaaaagctacccggcatgaaaccatcagtaaattatattca
aggacatatgttcacggaagtccacttatcccaacaaaaacagcatatgcagtcattgag
acactggaaaaatatgctccaacaatcacaaagcctgatatgaccagcaagctggaacag
gatatggataaaattgcagaaggtgaaattacagaaaatgatgtaattgatgaatcaagg
gagatgctgcagtctatattttctgaatttgaaaaatgccaggacaagatagccgaatct
ctcagggccggccttagagaagataagattgtgggatcgtgtccggaatgtaattccaag
ctgtcaatcaggcgatccaggagaggatcacgttttatagggtgtagtaactatcctgat
tgtacattttcactgcctcttccaaaaagcggacagataattgtaacggacaaatcatgt
gatgagcacggattatatcacttgagaataatttcaaaagggagaagaccctggaacctt
ggatgccctcagtgtaatttccttgaatggcaaaagtcccagaataacgaaaatcaagag
aagaacgagaaggttaccagcaaaaatgctcacaaaaaaactgtccctgccagcaaaaaa
aaatcggataaggtaacagagatctccggtattggtaaggttacagcagaaaaactggat
gaagctggaatcgtgaaaataggagacctactaaatgcagatgcaacggaaatatccaga
aaaaccaatatttccgtcaagaaaattaagaattggcagaaaattgcagttcccgataga
caaaattag
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