KEGG   Methanosalsum zhilinae: Mzhil_0867
Entry
Mzhil_0867        CDS       T01541                                 
Name
(GenBank) DNA ligase I, ATP-dependent Dnl1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
mzh  Methanosalsum zhilinae
Pathway
mzh03030  DNA replication
mzh03410  Base excision repair
mzh03420  Nucleotide excision repair
mzh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mzh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Mzhil_0867
   03410 Base excision repair
    Mzhil_0867
   03420 Nucleotide excision repair
    Mzhil_0867
   03430 Mismatch repair
    Mzhil_0867
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mzh03032]
    Mzhil_0867
   03400 DNA repair and recombination proteins [BR:mzh03400]
    Mzhil_0867
Enzymes [BR:mzh01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Mzhil_0867
    6.5.1.6  DNA ligase (ATP or NAD+)
     Mzhil_0867
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     Mzhil_0867
DNA replication proteins [BR:mzh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    Mzhil_0867
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     Mzhil_0867
DNA repair and recombination proteins [BR:mzh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     Mzhil_0867
   NER (nucleotide excision repair)
    Other NER factors
     Mzhil_0867
   MMR (mismatch excision repair)
    Other MMR factors
     Mzhil_0867
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C FecR_C RNA_ligase
Other DBs
NCBI-ProteinID: AEH60729
UniProt: F7XL21
LinkDB
Position
947097..948782
AA seq 561 aa
MTAFKEFAHVCSQIENTSSSLEITDMVAEFFRIVDTEELPVVIHFIMGEVFPAWSEEELG
IGKGLYYTSLSKVSGLSVDEIKEIVRKTGDIGKTTIEVMKNKSGDQVTFSVFFDDNTQLS
IIDVYEALKKIAAINGKGSQNIKMKNLQYIFSKASPQESQYMARLVLEELRIGVGEGIVR
DAIALAFDVPAESIERGFMLTNDMGAVGLAAKKGGIEEVEKLNMELNRPIKLMLAQVTPS
IKTAIEEMEEAAIEWKFDGARLQVHKDKDKVSIYSRKLENITNSLPDVVSAVKEYVNADT
AILDGEAFAVDENGKPKPFQEILKRLRRKYDIEITTRDIPLTVKFFDIMYLNGDYLIDLS
LIERRRLLGECVRNSNSITVDQQVVTDDPEIGEKIYSEAIRAGHEGIMIKNPQSPYTPGK
RGKNWLKKKPVMETLDLVVIGGEWGYGRRTNFIGSYTLSCYDPDSGNFLPIGKVGTGITD
ENLVELTGLFSDLIVVESGRDLEFKPEIVFEVAFEEIQKSTNYESGYALRFPRLVSIRDD
KSPHEADTISRVDEIYRSQRK
NT seq 1686 nt   +upstreamnt  +downstreamnt
atgacagctttcaaagaatttgcgcatgtatgcagtcagatagagaatacaagcagttca
cttgaaattacagatatggtagctgagtttttcaggatagttgatactgaagaacttcca
gttgtcatacattttattatgggggaagtatttcctgcctggagtgaagaagaacttggt
ataggtaaagggctttactatacctctttatctaaagtatcgggactttcagtagacgaa
attaaagagattgttcgaaagacgggtgatattggtaaaacaaccattgaagtcatgaaa
aataaatccggggatcaggtaaccttcagtgtcttttttgatgataatacacaattatcc
ataatagatgtatatgaagcactaaaaaaaattgctgcaattaatggtaaaggttctcag
aacataaagatgaaaaatctgcagtatattttcagtaaagcatcgccacaggaatctcag
tacatggcgcgtcttgtccttgaagagttgagaattggtgtcggggaaggaattgtaaga
gatgctattgctctggcttttgatgttccggcagagtctattgaaaggggatttatgctg
accaatgatatgggagcagttggattggctgcaaaaaaaggtggtattgaagaagttgaa
aagttaaatatggaattgaatcggcccattaaactaatgcttgctcaggtaactcccagt
attaaaaccgctattgaggaaatggaagaagctgctattgaatggaaatttgatggtgca
agactccaggtgcataaggataaggataaagtttcgatatattcaaggaagctggagaat
atcactaattcgctacccgatgtagtatctgctgtaaaggagtatgttaatgcagatact
gcaatattggatggggaagcctttgctgtggacgaaaatggaaaaccgaaaccatttcag
gaaatactcaaaaggcttcgtagaaagtacgatatagagatcactacaagagatataccc
ctgactgtaaaattctttgatataatgtatctgaatggtgattatcttattgatctttca
ctcattgaacgtagaagactgcttggcgaatgtgtcaggaacagtaactccatcacagtt
gatcagcaggttgtaacagatgatcctgaaattggagaaaagatatatagtgaagcaata
agagcgggtcatgaagggataatgatcaaaaatccacagtcaccatatacacccggtaaa
agaggcaaaaactggctcaagaaaaagccagtaatggaaacgctggatcttgtggtaatt
ggaggagaatggggatacggaagacgtactaattttataggatcttatacactttcatgt
tatgacccagatagtggaaactttttacccattggaaaggttggaactggtataaccgat
gaaaaccttgttgaactaacaggattgttttctgaccttatagttgttgaatccggaaga
gatcttgaatttaaaccggaaattgtttttgaggttgcttttgaagagatacagaaaagc
acaaattatgagtccggttatgcacttcgttttccacgacttgtcagtataagggatgat
aaatctccacatgaagccgatactatcagtcgtgtagatgaaatatacagatcacagaga
aaatga

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