Methanosalsum zhilinae: Mzhil_1168
Help
Entry
Mzhil_1168 CDS
T01541
Name
(GenBank) 3' exoribonuclease
KO
K12589
exosome complex component RRP42
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mzhil_1168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzh03019
]
Mzhil_1168
Messenger RNA biogenesis [BR:
mzh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Mzhil_1168
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Mzhil_1168
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AEH61024
UniProt:
F7XMK9
LinkDB
All DBs
Position
complement(1275509..1276276)
Genome browser
AA seq
255 aa
AA seq
DB search
MARLKKDYIYNLMLKGQREDHREFDQLRDIKVETDVVEKAEGSAKVQFGETQLIAGIKLQ
TGTPFPDSPDEGVIITSMELNPIASPFFEPGPPNENAVEMSRVVDRGIRESGTIDLKKLC
ITEGEEVWMVFIDIHVLNDGGNILDAASLGAIAALMTAKIPRETKGYGEDIPVPVREMPV
AVSLVDIEGQLMVDPTIDEETICDTKLTIISNQDGSICAMQKSGNGALSTDQVFEAVETA
TEKASEIREQYLLNI
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atggccagacttaaaaaagattatatttacaatttgatgcttaaaggacagcgagaggat
catcgtgaatttgatcagctaagagacataaaggtcgagacagacgttgtcgaaaaagct
gaagggtccgcaaaggtgcaatttggtgaaacacagctaatagcaggtataaaactacag
actgggacaccgtttcctgattctccagatgagggagttattattacaagtatggaattg
aacccaatagcatcccctttttttgaaccaggacctcctaatgaaaatgcagtggaaatg
tccagagtggtagataggggaatccgtgaatcaggcacaattgatttaaagaagttatgt
attacagaaggagaagaagtctggatggttttcattgatatacatgtattaaatgatggt
ggaaatattctggacgcagcttctcttggtgctattgcagcactgatgactgcaaaaata
ccacgtgaaacaaaaggttacggtgaagacataccagttcctgtgagggaaatgccggtt
gctgtaagtcttgtggatatagaagggcagttaatggtcgatcctactatagatgaggaa
acaatctgtgatacaaaattaacaataatctctaatcaggatggaagtatctgtgcaatg
cagaaaagtggcaacggagctctcagcactgatcaggtatttgaagcggttgagactgca
acagaaaaagcatctgagataagggaacagtatcttttgaacatttaa
DBGET
integrated database retrieval system
