Methanosalsum zhilinae: Mzhil_1169
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Entry
Mzhil_1169 CDS
T01541
Name
(GenBank) exosome complex exonuclease 1
KO
K11600
exosome complex component RRP41
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Mzhil_1169
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzh03019
]
Mzhil_1169
Messenger RNA biogenesis [BR:
mzh03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Mzhil_1169
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Mzhil_1169
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
AEH61025
UniProt:
F7XML0
LinkDB
All DBs
Position
complement(1276281..1277180)
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AA seq
299 aa
AA seq
DB search
MSDKPDKFIDDNGLRLDGRRVDEIRPMKIDIGVLSRADGSCYLEWGKNKVLAAVYGPRTL
HPRRKQIPDAALIRYRYNMASFSVEDRIRPGPSRRSVEISKVSAEAFEPVVLTKFYPNTV
IDIFTEIIQADAGTRTAAINAASIALADAGIPMKGLVSACAVGKVDGQLVLDLNKDEDNF
GAADLPVAMTQDGEITLIQMDGNLTQEEFKEAIEMVRAGCMEILEIQKKALYTKFGDDSS
FDLTEEDLSDIQADEQLIDEDADNPANEDDEGIDEPEDIDPDEKKINEEEELDGESDEQ
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgagcgataaaccggataaattcatcgatgataatggtctacgtctggatggcaggcgt
gttgatgaaataaggccaatgaagattgatataggtgtactctccagagccgatggatca
tgctatcttgaatggggtaagaataaagttctggctgctgtatatggaccgcggactctt
catcctcgaagaaagcagattccagatgctgcgctgataagatatagatataatatggcc
tccttttcagtggaggatagaatccgtcccggacccagcaggagaagtgttgagatatca
aaggtcagtgcagaggctttcgaacccgttgttcttacaaaattttatccaaatactgta
attgacatttttacagaaattattcaggcagatgccggtacaagaacggctgcaatcaat
gcagcttcaattgcgcttgcagatgcaggcattcctatgaaaggtctggtatctgcatgt
gcagtaggaaaagtcgatggtcagctggttcttgacctgaataaagatgaagataatttt
ggagctgcagaccttccggtagcaatgactcaggacggagagataactctgatccagatg
gatggaaatctgacacaggaagagtttaaagaagctattgaaatggtcagggctgggtgt
atggagatcctcgaaatccagaaaaaagcattgtacacaaaatttggagatgattcttct
tttgatttgaccgaagaagatctatctgatatacaggctgatgaacagctaattgatgaa
gatgcagataaccctgctaatgaagatgatgaagggatagatgagcctgaagatattgat
cctgatgaaaaaaagataaatgaggaagaagagctggacggtgaatccgatgagcaatga
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