Methanosalsum zhilinae: Mzhil_1273
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Entry
Mzhil_1273 CDS
T01541
Name
(GenBank) THUMP domain protein
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mzh
Methanosalsum zhilinae
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mzh03016
]
Mzhil_1273
Enzymes [BR:
mzh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Mzhil_1273
Transfer RNA biogenesis [BR:
mzh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mzhil_1273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_THUMP_arc
THUMP
Phage_Gene33
Motif
Other DBs
NCBI-ProteinID:
AEH61127
UniProt:
F7XN18
LinkDB
All DBs
Position
complement(1363940..1365187)
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AA seq
415 aa
AA seq
DB search
MNILEISKKIIAEGPICDHCLGRQFGKLSTGLTNDERGRALKLSITMEADRLSKEGMDSS
FLSSTEGNTCWVCNGLFKELDTWAEMALSKLSKYEYSTFLVGTIISGLLSENEEILWTES
GTLYAEPLKSELNREIGKIISQKTGKEVNFEYPDVVVMLDIAENNVKLQVRSLYIYGRYR
KLIRGIPQTRWPCRKCRGRGCESCEFTGKQYPVSVDELIREHVIEATRCAETKFHGAGRE
DIDALMLGNGRPFVVEAVDPVFRETDLRLLENKINEKSGGKIEVEGLKFASKEVIESLKS
SKADKVYNLKVTFKEPVSEKNLIYAVEHLAGSDIKQQTPLRVVHRRADIVRERHVHEMEL
EEINEDYAIIRVHCAGGLYVKELISSDDGRTVPSLSGILGVQAEVAELDVVDVKI
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacttgagatttctaagaaaataatcgcagaaggtcctatctgcgatcactgt
cttggaaggcaatttggtaaattgtccacgggcctgacaaatgatgaacgtgggagggca
ttgaaattatctattacaatggaagctgacagactttcaaaagaaggaatggacagttct
tttttgagtagcactgaaggaaatacatgctgggtatgcaatggcctttttaaagaactg
gatacttgggctgaaatggcactgtcaaaactttccaaatatgaatattcaacttttctg
gttggtacgattatcagtggtcttttgagtgaaaacgaagagatactctggaccgaatca
ggaacattatatgcagaaccacttaaatcagaacttaacagagagatcggtaaaatcata
tcacagaaaacaggcaaagaggtgaattttgaatatcctgatgttgtcgttatgctggat
atagcagaaaacaatgtcaaactgcaggtaaggtcactatatatttacggaaggtatcgc
aaacttatcagaggtattcctcagacaagatggccctgtagaaaatgcagaggcaggggt
tgtgaatcctgtgaatttaccgggaaacaatatccagtatcagtagatgaattaatacgt
gagcatgtcatagaggccacaagatgtgcagagacaaaatttcatggtgcaggccgtgag
gatatagatgccctgatgcttggcaatggcagaccttttgttgtggaagcagttgatcct
gtcttcagagaaacggatctcaggttgcttgaaaataaaataaatgagaaatctggcggt
aaaattgaagtagaaggacttaaatttgcttccaaagaagtaattgaatcactaaagtct
tcaaaggcggataaagtttataaccttaaagttacattcaaagagccggtttcagaaaag
aaccttatatatgcagttgagcatctcgcaggatcagatataaaacagcagacacctcta
cgtgttgtgcatcgaagggcggacattgttagagaaaggcatgttcatgaaatggaactt
gaggaaatcaatgaggattatgccattattcgtgtacactgcgccggtggactgtatgtc
aaggaactgatttccagtgatgatggaagaacagttccaagtcttagcgggattcttggt
gtccaggctgaagttgcggaactggatgttgtggatgtaaaaatataa
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