Methanosalsum zhilinae: Mzhil_1583
Help
Entry
Mzhil_1583 CDS
T01541
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mzh
Methanosalsum zhilinae
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mzh03016
]
Mzhil_1583
Enzymes [BR:
mzh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Mzhil_1583
Transfer RNA biogenesis [BR:
mzh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Mzhil_1583
Prokaryotic type
Mzhil_1583
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PH_SLA1
Motif
Other DBs
NCBI-ProteinID:
AEH61421
UniProt:
F7XPJ6
LinkDB
All DBs
Position
1694330..1695718
Genome browser
AA seq
462 aa
AA seq
DB search
MTIDADIKLKDGPDQLTQENTVIQMQVYDIEKQIGIELYSTSSQGTGGILRKLIEDFQVR
EITNRKEGFEGKYLILELTKHNWDTHHVVRELSRRLRISQKRIGFAGTKDKRAETTQKIS
IFDLNETDIENVHLKDVDLKVIGRSNKSIGLGDLTGNEFRITIRNIDHSKAELKEILSSI
TMEIDKNGGVPNYFGIQRFGSLRPITHLVGESLVKGDSEEAALKYISMTFQDEPEDTKNA
RNFVADTRNFIEGLKLYPHHLRYERTMMHHLVNEPGDYEGAFLILPENLRRMFVHAYQSY
IFNRIISERMRRGLPLNQAVKGDVVCFKNSAGLPDTSRTEKVSERTIDGINNLIRRKRAF
VTAPLIGYETEFSEDEPGEIERTIFDQTGVSRKHFAEIPVSGISSRGMRREILLNVSPVF
STEDDETSPGRSKAILEFTLPKGSYATTVLREYMKVHPLEMS
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
ttgaccattgatgcagatattaaattaaaggatggtccagaccagttaacccaggaaaat
actgtgattcaaatgcaggtttacgatatagaaaaacagataggaatagaattatactct
acctcatcccagggaaccggaggtattctcagaaagcttatcgaggattttcaggtaagg
gaaattacaaatcgaaaggaaggatttgaaggtaaatatctgatacttgaactgacaaaa
cataactgggatacgcatcacgttgtcagggaactctcacgcaggctcaggatcagccag
aaaagaataggttttgcaggtaccaaggataaaagagcagaaaccacacagaaaataagt
atatttgacctgaatgaaactgatatagaaaatgttcacctcaaagatgtggatctaaaa
gtgatcggaagatccaataaatccatagggctgggagatcttacaggaaatgaattcaga
ataactatacgcaatattgatcacagcaaggctgaactaaaagagatactcagtagcatc
acaatggaaatcgataaaaacggtggtgttccaaactatttcggtattcagagatttggc
tccctgcgacccattacacatcttgtgggtgaatctcttgttaagggagattcagaggaa
gctgcacttaaatatatttccatgacatttcaggacgaacctgaggatacaaagaatgca
aggaactttgttgctgataccaggaattttatagaagggttgaaactgtatcctcaccat
cttcgatatgaaagaacaatgatgcatcatctggttaatgaacccggtgactatgaaggt
gctttcctgatactgccggaaaaccttcgcagaatgtttgtacacgcttatcagtcatat
atattcaaccggattatctcagagagaatgcgaagaggacttccattgaaccaggctgtt
aaaggagatgttgtatgcttcaagaacagtgccggacttcctgacacatccagaactgaa
aaggtaagtgaaagaacgattgatggaataaataatcttatccggcgaaaaagagctttt
gtaactgctcctcttatcggatacgaaactgagttcagtgaagatgaacctggtgaaatt
gagagaacaatattcgatcagaccggtgtttccagaaagcattttgcagaaattcctgtc
agtggtatatcttccagaggcatgagacgagagatattgctcaacgtgagtcctgtattc
agtactgaagatgacgagacgagtcctggcagatcaaaggcaatccttgaatttactctt
ccaaagggtagctatgcaacaactgttctcagggagtacatgaaagtacatccccttgaa
atgtcctga
DBGET
integrated database retrieval system
