Methanosalsum zhilinae: Mzhil_1973
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Entry
Mzhil_1973 CDS
T01541
Name
(GenBank) DEAD_2 domain protein
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03022
Basal transcription factors
mzh03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mzhil_1973
09124 Replication and repair
03420 Nucleotide excision repair
Mzhil_1973
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzh03021
]
Mzhil_1973
03036 Chromosome and associated proteins [BR:
mzh03036
]
Mzhil_1973
03400 DNA repair and recombination proteins [BR:
mzh03400
]
Mzhil_1973
Enzymes [BR:
mzh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Mzhil_1973
Transcription machinery [BR:
mzh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Mzhil_1973
Chromosome and associated proteins [BR:
mzh03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
Mzhil_1973
DNA repair and recombination proteins [BR:
mzh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Mzhil_1973
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
PhoH
SLFN-g3_helicase
ATPase
nSTAND3
Zot
HK
AAA_25
Sigma54_activat
Pardaxin
Motif
Other DBs
NCBI-ProteinID:
AEH61807
UniProt:
F7XKU2
LinkDB
All DBs
Position
complement(2083790..2085970)
Genome browser
AA seq
726 aa
AA seq
DB search
MAQRGGYLKYFPKSSCYPNQKDAMDRIYSALLEKEIVLFEGACGTGKTLSALAPALHVGR
QQDKTVIIATNVHQQMVQFVNEAREIKKNNDIRVAVVKGKAAVCPHELDYEECNLRRENT
FEVLELEKEIQLKKQEIKSASQNYKESRDPSMVSLRDELVKELDAAQEKARTVRNRSCNE
LYEVLRYDSEMFRNWLFDDVRTPEEVNDFAFGKGMCGYELLKRELKYADLVICNFHHILN
GDIFSTLLGWLEKEPGDVIVIFDEAHNIESSARSHSSITLTEHTVEKTISEIDANSDQIP
EEGLHNLFSLLLSTIQDTYNSRFRFGERERVGRRWYDIRISDPYERNDIIRARFLRSARE
NGFADEKSIQELLATAVEFGSQLDETYRDQYKKGLTTVLKRSHIHQTAAFLSSYLYLSNN
PNYYPVLNVRRDSNNEIYGRLELFTCIPKNVTQPLFESLYSAILMSATLRPFNMVKTTCG
INRNTCEIAYATSFPLEKRLTIAVSIPPLFSKNRDDIQASEAIEKGLLDSIEYSAGNVII
FFQNSFEAARYYEKIQSKMEDIPVFLDEVGVSAQNVRTEFFRIGESGEKAVLISYLWGTL
SEGIDYRDERARTVVIVGVGYPGLDDRMRAVESAYDHAFGYGSGWEYAVQIPTIRKIRQA
MGRVVRSPSDYGARILLDGRFLTDSKKRFGKFSVFKEFPPEEQKEIVDVELDKMKNSLMN
FFMENG
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atggcccagagaggaggatatttgaaatatttcccgaaaagcagctgctatccaaaccaa
aaggatgcaatggataggatatactcagcactgcttgagaaggaaatcgtactgtttgaa
ggtgcctgcggcacaggaaagactctcagtgccctggctccggccctgcatgtgggcaga
cagcaagataaaactgtgattatagcaaccaatgtacaccagcagatggttcagtttgta
aatgaggcccgggagatcaaaaagaataatgatatcagggtggcagttgtcaaaggaaag
gctgccgtatgcccccatgaactggattatgaggaatgcaatctaaggcgggaaaacaca
tttgaggtactggaacttgaaaaagagatccagttaaaaaaacaggagatcaaatcagca
tcccagaattataaagagtcaagggatccctcaatggtgtcccttagagatgagctggta
aaggaacttgatgctgcacaggaaaaggccaggaccgttcgcaaccgttcatgcaatgaa
ctgtatgaggtgctcagatatgacagtgaaatgttcaggaactggctatttgatgatgta
cgcacaccggaagaggtgaacgattttgcatttggaaaggggatgtgtggatacgaactg
ctgaaaagggaactaaaatatgcagatcttgtcatatgcaatttccatcatatactcaat
ggcgacatcttctcaacactccttggatggctggaaaaagaacccggggatgtaattgtg
atatttgatgaagctcacaatatcgaatcctctgcacgttcccattcttccatcaccctg
accgaacatactgttgagaagaccatatctgaaatagatgcaaattctgatcagatacct
gaggaaggacttcataacctgttctcccttcttctttcaacaatacaggacacctacaat
tccaggttcaggttcggtgaaagggaaagagttggtcgcagatggtatgatatacgtata
agtgatccctatgaaaggaatgatatcataagagccaggttcctgcgcagtgcacgtgag
aatggatttgccgatgaaaaaagcattcaggaacttctggcaactgcagtagaatttggc
tcacagcttgatgaaacttacagggatcagtataagaagggactgacaactgttctcaaa
cgttcacatatacaccagacagctgcatttctgtcaagctacctgtacctttccaataat
ccaaattactatcctgttctcaatgtcagaagggattcaaataatgaaatatacggtcgt
cttgaactgtttacctgtatacctaaaaatgtaacccagccactctttgaatcgctgtat
tctgcgattctcatgtctgcaacccttcgcccattcaatatggtaaaaaccacatgtgga
ataaatcgcaatacatgtgagattgcctacgccacgtcatttccactggaaaaaagactt
acaatagcagtctccatacctcccctcttttcaaagaacagagatgatattcaggcttct
gaggctatcgaaaaaggactgctggattcaatagagtattctgcaggaaatgtaatcatc
tttttccagaattcctttgaagctgcaagatactatgaaaagatccagtcaaagatggaa
gatatacctgtgtttctggacgaggttggagtgtctgcccagaacgtgaggaccgaattc
ttcaggatcggagaaagtggagagaaggctgtccttatatcgtacctatggggtacgcta
agtgagggcattgattatcgcgatgagagggccaggaccgtggtgatagttggtgttgga
tatccgggactggatgatcggatgagggcagtggaatctgcctatgatcatgcatttggt
tacggatctggttgggagtatgctgtccagatccctacaataaggaagattcgacaggca
atgggaagggttgttcgctcgccatctgattatggtgcccgaatacttctggatggaaga
tttctgactgactcaaagaaacgatttggtaagttctccgtttttaaagaatttccaccg
gaagaacagaaggagatagttgatgttgaactggataagatgaaaaattcactcatgaac
ttttttatggaaaatggatga
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