Methanosalsum zhilinae: Mzhil_1995
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Entry
Mzhil_1995 CDS
T01541
Name
(GenBank) TATA-box binding family protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mzh
Methanosalsum zhilinae
Pathway
mzh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Mzhil_1995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mzh03000
]
Mzhil_1995
03021 Transcription machinery [BR:
mzh03021
]
Mzhil_1995
Transcription factors [BR:
mzh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
Mzhil_1995
Transcription machinery [BR:
mzh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
Mzhil_1995
RNA polymerase III system
TFIIIB
Mzhil_1995
RNA polymerase I system
SL1/TIF-1B
Mzhil_1995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Auxin_resp
Phage_int_SAM_6
Motif
Other DBs
NCBI-ProteinID:
AEH61828
UniProt:
F7XMF4
LinkDB
All DBs
Position
complement(2104591..2105142)
Genome browser
AA seq
183 aa
AA seq
DB search
MTGYNIKIENVVASTKLAESFDLTKIEMEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVEDVHTVIKNMARKLNSIGVETVEDPDITVQNIVASADLHAILNLNAIAIG
LGLENIEYEPEQFPGLVYRIDEPKVVVLIFSSGKLVVTGGKSPEDCEMGVEVVRQQLDSM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgactggatataatatcaaaatcgaaaatgtggttgcatccactaaacttgcagaaagt
tttgacctgacaaagatagaaatggaatttgaaggtgcagaatataacaaacagaagttt
cctggtcttgtatatcgtgtttctgacccaaaggctgcttttctggtattcacatccggt
aaggtagtctgtacaggtgccaagaatgtggaggatgtacacaccgttattaagaatatg
gcccgcaaactcaattccataggggtcgaaaccgttgaggatcctgatataacagtgcag
aacattgttgcctctgctgatcttcatgcaatacttaatctaaacgcaattgcaatagga
cttggtcttgaaaatattgaatatgaacctgaacagttccctggacttgtatacaggatt
gatgaaccaaaggtagtagttctgatattcagttcaggaaaactggttgtcacaggtggc
aaatcccccgaagactgtgaaatgggtgttgaagtggtaagacagcagcttgacagcatg
ggattgctgtaa
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