Methanosalsum zhilinae: Mzhil_2001
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Entry
Mzhil_2001 CDS
T01541
Name
(GenBank) SMC domain protein
KO
K03546
DNA repair protein SbcC/Rad50
Organism
mzh
Methanosalsum zhilinae
Brite
KEGG Orthology (KO) [BR:
mzh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mzh03400
]
Mzhil_2001
DNA repair and recombination proteins [BR:
mzh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Mzhil_2001
Archaeal homologous recombinant proteins
Mzhil_2001
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SMC_N
AAA_15
AAA_29
AAA_21
DUF5082
AAA_13
AAA_27
DUF724
Fib_alpha
ERM_helical
ATG16
Seryl_tRNA_N
GTP-bdg_M
DUF4200
SbcC_Walker_B
CPT
Nuf2_DHR10-like
MerR-DNA-bind
AAA_16
MbeD_MobD
DUF1664
Baculo_PEP_C
MukB
ABC_tran
RsgA_GTPase
DUF3450
GAS
Motif
Other DBs
NCBI-ProteinID:
AEH61834
UniProt:
F7XMF7
LinkDB
All DBs
Position
complement(2112140..2114806)
Genome browser
AA seq
888 aa
AA seq
DB search
MKLKNLQIENIRSYENLDISFDDGVTVVSGNNGSGKSSLLEACFIALFGSRALTKDYVIG
DMIRKGSSKASINLEFEYDGNIFEIEQAFRMSSKTGRATSTRSVVRSGNEVIADQATQTY
EFVCNMLGMDEEAYRNCVYIRQGEIDVLINARSQDRQRMIDDLLQIGRLEEYQERSVSAR
TGIGRHQRYTDQKIGDIKSEIETIRSQDPYDTLSALKEESKKLQVKISQLQEKRNKALVK
INSLETDIREYDKVMDDLSSLKGQQNKLMDRKASLYQSIESSGDKIRSYKRAMSELEAET
RKLKTNLGISADAENMGTVASEIETFERNISDKINALNHEISSLEKERKQKKESLESLEK
QLNSKNRRIADLKRHLDSRSREIEDLERSVRQMEQKKNDTVAEAKDLGFSPEKLEEIDEI
MGLLRDQQKRLHGKESGIRTRLEELNKKIQTNREMLEKGICPTCGQDLEGSPVSKQENED
LMKVKEYSSELLDIERKQKEIEERIKKVDLARKLDRKLQDYTYQKKIAETNIQSNGKMID
DYNKQIAELEEEIVSLKDQKEEVIRALDSLSDSSRSLNSRNTNLKTEYSQVQKKLDGIRH
IMKNTDKVQEYLSKAEQLENGIKSDQDKVQMLEENISDLQRRISELRKKLEAENIDEMKK
NYRLYRKAYDNMGNDIEKMNEKMNELSRQEGKLEADISRLSTLEKDLQLMINQKKYLERV
YEEGRSLEDMYKRLRTELRLKNIDALDSLMNEIFSLMYTNNAYARIELDQDYNFTVYEKD
GTPLEPKLLSGGERAIFNLVLRCAIYRLMSMGRGNDSIDLPPLIMDEPTVFLDRGHIHQL
IKLIDMMRNVGVGQILIVSHDESLIDSADLVFSVEKDPVTNISFISSG
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactgaaaaaccttcagatagaaaatattagaagttatgaaaatctggatatctct
tttgatgacggggtcacagttgtctcaggaaacaatggcagtggaaagtcaagtctcctg
gaagcctgctttatagctctttttggaagcagggcccttacaaaggattatgtgatcggg
gatatgatacgaaaaggatcatcaaaggcgtccatcaatcttgagtttgaatatgatgga
aatatatttgagattgaacaggccttcaggatgtcttcaaagaccggacgtgctaccagt
accagatcggttgtgagatcaggaaatgaggtgattgcagaccaggctacccagacatat
gaatttgtatgcaatatgcttgggatggatgaggaagcatatagaaactgtgtttatata
aggcagggtgagattgatgtgctcatcaatgcaaggtctcaggatcgccagcgtatgatc
gatgatctgctgcagattggaagacttgaggaataccaggaacggtcggtcagtgccagg
accggcataggtcgccaccagagatatactgaccagaagatcggggatattaagtctgag
attgaaacaatcagatcacaggatccttatgataccctttctgcccttaaagaggaatcc
aaaaaactccaggttaaaatcagccagctccaggagaagagaaataaagccctggtaaag
atcaatagtcttgaaaccgacatccgggaatatgacaaggttatggatgacctatcttct
cttaaaggtcaacaaaataagctgatggacagaaaagcatctctctatcagtccattgaa
agttctggagataagataaggtcctataaaagggcaatgagtgaacttgaagctgagacc
cgaaaattgaagaccaaccttgggatatctgctgatgcagaaaatatgggaacggttgca
tctgaaatagaaacttttgagcgtaatataagtgataaaataaatgctctgaatcatgaa
atcagctcactggaaaaggaaaggaaacagaagaaagagtcacttgaatctctggaaaaa
cagctgaattcaaagaacagaaggattgctgatctaaagcgacatctggattccagatcc
cgtgaaattgaggaccttgaaaggtctgtaaggcagatggagcagaaaaaaaatgataca
gttgctgaggccaaagaccttggattctcacctgaaaagcttgaagaaatcgatgagatc
atgggacttctgagagatcagcaaaagcgattgcatggaaaggaaagtgggataaggacc
agactggaagagctgaataaaaaaatacagacaaacagggaaatgctcgagaaaggaatc
tgtccaacctgtggtcaggatcttgaaggttctccagtctctaaacaagagaatgaagat
ctcatgaaggtaaaagaatactccagtgaactactggatattgagagaaaacagaaagag
atcgaagagaggatcaaaaaggtagatcttgcaagaaaactggacaggaaactgcaggat
tatacatatcagaaaaagatcgctgagacaaatatccagtcaaacggaaaaatgattgat
gattacaataaacaaattgcagagttggaagaggaaattgtttcattaaaggatcaaaag
gaagaggtgatcagggctcttgattcactctctgacagttccagatcattgaattccaga
aatacaaatctgaaaacagaatactcacaggtccagaagaaacttgatggtatcagacac
ataatgaaaaatactgacaaagttcaggaatatctcagtaaagctgaacagcttgagaat
ggtatcaaatcggatcaggataaggtgcagatgctggaagagaatatctctgatctccag
aggcgaatatcagaacttagaaagaagcttgaagctgagaatatagatgagatgaagaaa
aattacaggctttacagaaaagcctatgataacatgggtaatgatattgaaaaaatgaat
gaaaaaatgaatgagctttcaagacaggaagggaaacttgaagctgatatcagccggctg
tctacacttgaaaaagaccttcagctaatgatcaaccagaagaagtatcttgagagggta
tatgaagaaggtcgatcactggaggatatgtataaacgcctcagaacagaacttcgtcta
aagaatatcgatgcccttgacagtctgatgaatgagatattctcactcatgtataccaac
aatgcctatgcccgtatagaactggaccaggattacaatttcacagtctatgagaaggat
ggtactccactggaaccaaagcttttaagtggaggagagagggcaatatttaatctagta
ctcagatgtgctatctataggctcatgtccatgggcagaggaaatgattcaattgacctt
cctcctctgataatggacgaaccaacggtatttctggaccgtggtcatatacaccagctc
ataaaactcattgatatgatgcgcaatgtgggcgtgggacagatcctgatcgtatcccat
gatgaatctcttatcgactcggcagatcttgtgttctcagttgagaaggaccctgtgaca
aacatttcatttatttcatctggctga
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