KEGG   Methanolobus zinderi: HWN40_01280
Entry
HWN40_01280       CDS       T06665                                 
Name
(GenBank) replication factor A
  KO
K07466  replication factor A1
Organism
mzi  Methanolobus zinderi
Pathway
mzi03030  DNA replication
mzi03420  Nucleotide excision repair
mzi03430  Mismatch repair
mzi03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mzi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    HWN40_01280
   03420 Nucleotide excision repair
    HWN40_01280
   03430 Mismatch repair
    HWN40_01280
   03440 Homologous recombination
    HWN40_01280
   03460 Fanconi anemia pathway
    HWN40_01280
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mzi03000]
    HWN40_01280
   03032 DNA replication proteins [BR:mzi03032]
    HWN40_01280
   03400 DNA repair and recombination proteins [BR:mzi03400]
    HWN40_01280
Transcription factors [BR:mzi03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    HWN40_01280
DNA replication proteins [BR:mzi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    HWN40_01280
DNA repair and recombination proteins [BR:mzi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     HWN40_01280
   MMR (mismatch excision repair)
     HWN40_01280
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     HWN40_01280
SSDB
Motif
Pfam: tRNA_anti-codon CDC24_OB3 OB_Ssb-like REPA_OB_2 DUF3127 Rep_fac-A_C OB_MEIOB_N
Other DBs
NCBI-ProteinID: QLC49000
UniProt: A0A7D5EF20
LinkDB
Position
complement(265772..266896)
AA seq 374 aa
MDEVTEIYDKLGDIISQEEFRKKVDEKVDQMSGLCDMRTAAMLVAHDLGVNETETSVQKI
ADITPESGNVRLIAKVMSVFPAKEFNRNDGTIGRVANLIVADDTGSIRLTLWDDKADLVK
TGDIEIGQNFQISGYVKEGYSGIEVNIGNNGILCESEEKIEACVDCTKIEDVKNGMGDLN
LKGKVLDISEVRTFNRKDGSTGRVSNITIGDDTGKIRVTLWDEKTELATGMNTGESVEII
NAYARENNFTQQVEVQVGSRTVLKAIDEDVNYSENFTPISDIIPGEPYSVKGSVSGLGEL
REFSRDDGTVNMVSNIYVSDDTGRIRVALWGDHALLVDELDIDTEIEIIDAFSKSGFNDE
IELSAGNRTRIVVL
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggacgaagttactgagatatacgataaacttggagacatcataagtcaggaggagttc
cgcaaaaaggtcgacgagaaggttgaccagatgagcggattgtgtgatatgcggaccgca
gcaatgctggtagcacacgatctgggagtcaatgaaacggaaacctccgtacagaaaata
gccgacatcacacctgaaagcggaaatgtaaggctcatcgcaaaggtcatgtcagtcttt
cctgcaaaggaattcaaccgcaatgacggcaccatcggaagggttgcaaaccttattgtt
gcagatgatacgggatccatacgcctgacactctgggatgacaaggcggacctcgtcaag
acaggtgatattgagatcgggcagaacttccagataagcggttatgtaaaggaaggatac
tcgggaatcgaggtcaacatagggaacaacggaatactctgcgagagtgaagagaagata
gaggcctgtgtcgactgcacgaagatcgaggatgtcaagaatggcatgggggatctgaac
ctcaagggaaaggtacttgatatctccgaggtcaggacgttcaaccgcaaggacgggtcc
acaggaagggtatcaaacatcaccatcggtgacgataccggtaaaataagggttaccctc
tgggatgagaagaccgaactggcaaccggaatgaacacaggcgagtccgtggagataatc
aatgcatatgccagggagaataacttcacccagcaggtggaagtccaggtaggaagccgt
actgtcctgaaagcgattgacgaggatgtgaactactccgagaacttcacacccatatcc
gacataatcccaggtgagccatactctgtcaagggatctgtttcaggtcttggcgaactc
agggaattttcccgtgacgacggtactgtgaacatggtgtccaacatctatgtatcagat
gacaccggcaggataagggttgcactatggggtgatcatgcattacttgtggatgagctt
gatatcgacacagagattgagatcatcgacgcattctcaaaatcagggttcaacgacgag
atagaactcagtgccggaaacaggacaaggatcgtcgtactgtga

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