Methanolobus zinderi: HWN40_02465
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Entry
HWN40_02465 CDS
T06665
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
mzi
Methanolobus zinderi
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mzi03016
]
HWN40_02465 (thpR)
Enzymes [BR:
mzi01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
HWN40_02465 (thpR)
Transfer RNA biogenesis [BR:
mzi03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
HWN40_02465 (thpR)
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GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Motif
Other DBs
NCBI-ProteinID:
QLC51189
UniProt:
A0A7D5ID05
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All DBs
Position
493655..494200
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AA seq
181 aa
AA seq
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MVRVFVAVDLPEELHSKVADVQAKFDDFKFKFVNPEIVHITMKFLGEVPDERIGDISKAL
DSVSCEPFEATVRGVGVFPKPRFAKVIWLGCEGDFEKLYKLVDESLATFQFSKDLHPFSA
HATLARIKYLPKKKKEDFMKLLEELKDIDVGSMQVDSIRLKKSTLTPTGPVYETLHEVKL
G
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
ttggtgagagttttcgtagcagtggatttgcctgaagagttacactcaaaggttgctgat
gttcaggctaaatttgatgattttaaattcaagtttgttaatccggaaattgtacatatt
accatgaaatttcttggtgaggtccctgacgagaggatcggggatatatcaaaggcgctt
gattcggtatcatgtgaacccttcgaggcaacagtcagaggagttggtgtcttcccgaaa
cctcgttttgcgaaggtgatctggctcggttgtgagggtgatttcgagaaactgtataag
cttgtggatgaatcactggcaaccttccagttttctaaagaccttcatcctttcagtgca
catgcaacccttgcaaggataaaatatcttccaaaaaagaaaaaagaggatttcatgaag
ctgctcgaggaattaaaagacatagatgtgggcagcatgcaggtagactccatcaggcta
aagaaaagcactcttactcccacgggtcctgtctacgaaacactccatgaagtgaaactg
ggataa
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