Methanolobus zinderi: HWN40_02980
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Entry
HWN40_02980 CDS
T06665
Name
(GenBank) RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mzi
Methanolobus zinderi
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mzi03016
]
HWN40_02980
Enzymes [BR:
mzi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HWN40_02980
Transfer RNA biogenesis [BR:
mzi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HWN40_02980
Prokaryotic type
HWN40_02980
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
QLC49301
UniProt:
A0A7D5I438
LinkDB
All DBs
Position
589552..590565
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AA seq
337 aa
AA seq
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MTASDILPSEYPRELIQKAEAITDPEYGCPPAERPIRDYIEMGIVNLDKPRGPTSHEVTA
WVKDILELNRAGHSGSLDPGVTGVQPIMLGRATKAVSALRLSGKEYICLMRLHEPVPEKR
VRSMCRQFTGPIFQMPPVVSAVKREVRVRMIYYLEVIEVKDRSVLMRVGCEAGTYLRKLC
HDIGAALGCGAHMQQLRRTKTGPFNEDTLVTLHQLKDAYVFWKEDGDESYLRKYVRPMEE
GLSHLPKIIIRDSAVDAVCRGAEFATPGIVSVDSNIKKDNTICLFSLKGEAVALCKSRMD
AEEMLNQEHGIAAVTERVIMDAGTYPQGWHSKPEKTQ
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttctgatattttaccatccgaatatccacgtgaactaattcaaaaagcagag
gctataactgatcctgaatacggatgtcctcctgcagagcgtccgatcagggattatatc
gagatgggaattgtcaatcttgataagccgcgcggtcccaccagtcatgaggtgactgcc
tgggtaaaggatattctggaattgaacagggccggacattcgggctcactggaccctggt
gtgacaggtgtacagcctattatgcttggcagggccacaaaggccgtttctgccctgcgt
ctctcaggcaaggaatatatctgcctgatgcgtctgcatgaacctgttcccgagaaaagg
gtccgtagcatgtgcagacagttcacgggtcccattttccagatgccacctgtggtgtct
gctgtaaagcgtgaggtgcgtgtaaggatgatctactatctcgaggtgattgaggtaaag
gatagatccgtgctgatgagggtcggatgtgaggcaggaacctacctgcgtaaactctgc
catgatatcggagccgcacttggctgcggggctcatatgcagcagctgcgcaggacaaag
acaggtcctttcaatgaagatactcttgttacactacatcagctcaaggatgcctatgtt
ttctggaaggaggatggcgatgagtcttacttacgtaagtacgtgcgtccaatggaagaa
ggtctcagtcatctcccgaagatcattatccgggacagtgccgttgatgcggtatgcagg
ggtgcggagtttgcgactcccggcatagtaagcgtcgatagtaatataaaaaaggataat
actatctgtctcttttctttaaaaggtgaggctgttgccctgtgcaagtcccggatggat
gctgaagaaatgctcaatcaagagcatggaattgcagcagtgaccgaaagagtaataatg
gatgctggcacttatccgcaaggctggcacagcaagccagaaaaaacacaataa
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