Methanolobus zinderi: HWN40_04405
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Entry
HWN40_04405 CDS
T06665
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mzi
Methanolobus zinderi
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mzi03032
]
HWN40_04405
03400 DNA repair and recombination proteins [BR:
mzi03400
]
HWN40_04405
Enzymes [BR:
mzi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HWN40_04405
DNA replication proteins [BR:
mzi03032
]
Prokaryotic type
DNA Topoisomerases
HWN40_04405
DNA repair and recombination proteins [BR:
mzi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HWN40_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Zn_ribbon_Top1
HHH_5
DNA_pol_lambd_f
IMS_HHH
RAD51D_N
Zn_ribbon_PaaD
SAM_BAF
DUF6964
Cdd1
Motif
Other DBs
NCBI-ProteinID:
QLC49550
UniProt:
A0A7D5J894
LinkDB
All DBs
Position
complement(875539..877764)
Genome browser
AA seq
741 aa
AA seq
DB search
MHLIIAEKHIAAKRIANILSPKKLKKVRVSGVDTYEFGSEEDKKVFIGLSGHIVKLDFPK
AYNNWQKVESKDLIDAEIVTASTQVKIVSALKKLGKQATKVTIATDYDREGELIGVEALD
ILKNVNSEIEFDRVHYSAITPKEIEQAFGNPTKIDFNLADAGHSRQVIDLVWGASLTRFI
SLAAGRLGNMFLSVGRVQSPTLALIVEREKERDVFIPKPYWELSANLRTGKGEEFKVEHK
TKRFWKKEEVDEILKKIGDTATVSSVNTSTKTDKPPTPFNTTEFISAASSIGFTAANAMR
IAESLYMNGFISYPRTDNTVYPESIDLRAQIEVFSKGPFKEYAKKLLQKKELKPTRGKKE
TTDHPPIYPASLAKKSELNEQEWKVYELVVRRFFATFAEPAQWQTIRARFDIDSEEFKAN
GARLIVPGWRWYYHYNAPEDRLLPELKEGEKLEVLDKIIEDKETKPPGRYGQGRLIRIME
ELGLGTKATRHEIISKLYSRAYIHGNPLQPTKTAYAVVEALEKFAPTISKHDMTSKLEAD
MDRIAEGQIPEDEVLNESREMLFSIFEELEENKDNVSEALRAGLREDKIIGNCPNCGSNL
MVMRSRKGSRFIGCEGYPDCNFALPLPRGGKIIVTDKTCEDHDLYHVTIINSGKRPWKLG
CPHCNFEEWQKAQEEEKKNNNGKIKPKKITDISGIGKVTAGKLEDAGVSEVDDLIEVDAF
ELAKTTNIPVKKIRNWQDAIA
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcatctcatcatagcagaaaaacacattgcagcaaagaggatagcaaatatcctttca
ccgaagaagctgaaaaaagtacgcgtcagcggagttgatacctacgaattcggctctgaa
gaagataagaaggtgttcatcggactcagcgggcatatagtaaagctggatttcccgaag
gcatacaacaactggcagaaggttgagtcaaaggatcttattgacgccgagatcgtcaca
gcttccacccaggtaaaaatcgtgtccgcacttaagaaactgggtaagcaggccacaaag
gtgacaattgccactgactatgacagggaaggtgagctcatcggtgtcgaagcccttgac
atactgaaaaatgtgaattcggaaatcgaattcgaccgtgttcactacagtgccatcaca
ccaaaggaaatagagcaagcttttggaaatcccactaaaatagatttcaacctggcagat
gcgggacattcaagacaggtcatcgatcttgtatggggtgcttcgcttacccgttttatc
tctcttgccgccgggcgtctcgggaacatgttcctttccgtgggaagggtacagtcaccg
acacttgccctgatcgtcgagcgggaaaaagaaagggatgtattcattcccaaaccctac
tgggaactttcagccaatctcaggacgggaaaaggtgaagaattcaaggtcgaacacaag
acaaagcgcttctggaagaaggaagaggttgacgagatattaaaaaagatcggagacacc
gccacggtatccagtgtcaacacatccaccaagacggacaaacctccaacaccattcaat
accacggagttcatcagtgcggcaagttccatcggtttcacggcagcaaatgccatgagg
atagccgaatccctgtatatgaacggtttcatctcgtacccaaggacagataatacagtc
tatcccgaaagtattgacctgagggcacagatcgaggtattcagcaagggacccttcaag
gaatatgcaaagaagcttcttcagaaaaaagagctaaaacccacaaggggtaagaaagag
acaacagaccaccctcctatctatccagcatcccttgcaaaaaagtcagagctcaatgaa
caggaatggaaggtctacgaacttgttgtcaggcgtttctttgcaacctttgcagaaccc
gcccagtggcagaccatcagagcgagatttgacatcgattccgaggaattcaaggccaat
ggtgcgcggctgatagttcccggatggagatggtactatcactataatgctccggaggac
aggctcctgccggaacttaaagaaggggaaaaactcgaggtcctggataagatcattgag
gacaaggaaacaaaaccgcccggaagatacggacagggaagactcatacgtatcatggaa
gagctcggactcggtaccaaggccacacgccatgagataataagcaaactatactcaagg
gcatatattcatggaaaccctcttcagcccaccaagaccgcctatgcagtggtggaagca
ctggagaagttcgcacccaccatatcaaagcatgatatgacaagtaagctggaagctgac
atggaccggatagcagagggtcagataccggaagatgaagtcctgaacgagtcaagggaa
atgctgttctccatcttcgaggaacttgaggagaacaaggacaatgtcagtgaagccctg
cgtgccggtctgagagaggataagatcataggtaactgtcctaactgtggctccaacctc
atggtaatgcgttccagaaagggatcaaggttcatcggatgtgagggttatcccgactgt
aatttcgcactgccgcttccaagaggaggcaagatcatagttacggataagacctgcgag
gatcacgatctttatcacgtcacaattatcaattccgggaaaaggccctggaaactggga
tgtccccactgcaatttcgaagaatggcagaaggcccaggaagaagagaaaaagaataat
aatggcaagatcaaaccaaagaagataacggatatatccggtatcggaaaggtaactgca
gggaaacttgaagatgcaggcgtatccgaggtcgatgatctgatcgaagttgatgctttc
gaacttgcaaagaccactaacatacctgtgaaaaagatcaggaactggcaggatgccatt
gcctga
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