Methanolobus zinderi: HWN40_06985
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Entry
HWN40_06985 CDS
T06665
Name
(GenBank) DEAD/DEAH box helicase
KO
K03725
putative ATP-dependent RNA helicase [EC:5.6.2.-]
Organism
mzi
Methanolobus zinderi
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzi03019
]
HWN40_06985
Messenger RNA biogenesis [BR:
mzi03019
]
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Others
HWN40_06985
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5814
DEAD
Helicase_C
ResIII
MGP3_C
DEXQc_Suv3
Motif
Other DBs
NCBI-ProteinID:
QLC50003
UniProt:
A0A7D5I518
LinkDB
All DBs
Position
complement(1414281..1416758)
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AA seq
825 aa
AA seq
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MTLWILFIAERSKITVLAIRDKKKKPLFVGEVVLRNTSGGPRPHKFKVKTDKGEELHPPS
EITDLLRKANRIMIAKDGDQEQTSDLVAMLQGFQLSADVVNVCRFCVLKDMFNFLNRRSI
KYHREKICEDCAREELYRVLASSQTFYSDEACERLESILLKTRDLDRTLLMLSPEDLDHE
LTRFDSIAASKEISGTRIKELPIRRKFKDLLLKKSDTLLPVQSLSVESGLLKGQNQLVTS
VTATGKTLIGELAGVENILRNKGKLLYLVPLVALANQKYDQFTKRYSNLGIQTSIRVGSA
RIKASKNDKSKRTLDSDIIIGTYEGIDYILRTGGADMLGQVGTIVVDEVHTIEDEERGHR
LDGVIGRLKYVAPSAQFIYLSATVAKPQLMAKQLGAKLIEYEYRPVPIERHLVLCPEHSK
IKIMTRLVRDEFNKVSSKGHKGQTIVFTNSRRNCHRIAEALPMYAAPYHAGLTSEERKKV
EVSFGKGKLPVVVTTAALAAGVDFPASQVIFESLAMGIEWLNMQEFLQMLGRAGRPDYHD
RGEVVLLAVPNKKYTSNQGDTEDAVAIKLLKGEMQHIGVDYGEEEKTEEILATAAVTHSV
KDLKRIHANMLADYSVDFLIKRLERSKFLHRKGDSIKLTRFGKIASGHFLSVSKAFLIRD
AVMMEQSPLTTVSNLEFFDSVYFKYAARISAALNINLPSRVFQGASLDILFEGENMQKLD
ISLRDQVFEFASDFLTCSCKDSPYCGCAEHKFSEKIISIRAEGYDPVGIVRKLENLYGVT
AYPGDVLGYLDNVVRNLEAVEMIARAYSKKDIASEARRLRKQVEG
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgactctctggatattatttatagccgaaagatcaaaaataacagtccttgcaataagg
gacaagaagaaaaaacctctttttgtcggagaggtggtgctaaggaacacttccggtggt
ccgaggcctcacaagttcaaagtaaaaaccgataaaggtgaagagctgcatccgccatcg
gagatcacggacctgctgcgaaaggccaatcgtatcatgatagcaaaggatggggatcag
gagcagacctcagatcttgttgctatgctgcagggctttcagttaagtgcagatgtcgta
aatgtctgcaggttctgtgtcctgaaagacatgttcaatttcctgaacagaaggtcaatc
aaataccacagggaaaagatatgcgaagattgtgcaagggaagaactatacagggtcctg
gcaagctcgcagaccttctacagtgacgaagcatgtgagaggctggaatcgattctcctg
aaaacccgggatcttgaccgaaccctgctgatgctgagtcccgaagaccttgatcacgaa
ctcacgcggtttgattcaatagccgcaagcaaggagatttccggaaccaggattaaagag
ctcccgatccgccgcaaattcaaggatcttcttctgaagaagtccgataccctgctgccg
gtacagtcactttcggtcgaaagcggcctgctcaagggacagaaccagcttgtgacttcc
gttaccgcaaccggtaagacgcttatcggagagcttgcaggtgtcgagaacatcctgaga
aataagggaaaactgctctatctggtcccccttgtggcacttgcgaaccagaaatatgac
cagttcacaaagagatactcaaatcttggcatacagacatccatcagggttggtagtgcc
cgtatcaaggcatcgaaaaacgataaatcaaaaaggacacttgattcggatatcattatc
ggtacatacgaaggtatagattatatacttcggaccgggggtgccgatatgcttggtcag
gtcggtacgatcgttgtggatgaggtccacaccatagaggatgaggagcgtggccacagg
ctggatggtgttatcgggaggctaaagtatgtggcacccagtgcacagttcatatatctc
tcagccaccgttgcaaaaccgcagcttatggcaaaacagctcggtgcaaagcttatagag
tacgagtaccgtcctgtgcccatagagagacatctggtgctctgtccggaacattcaaag
atcaaaattatgacccggcttgtcagggacgagttcaacaaggtctcatcaaaggggcac
aagggtcagaccattgttttcacaaactcaagacgtaattgccatcgtatagccgaagca
ctgccaatgtatgcagctccgtatcatgcgggtcttacaagtgaggaacgcaagaaggtt
gaggtgagttttggtaagggcaagcttccggtggtagtgacaacggcagccctggcagca
ggagtggatttccctgcctcgcaggtaatatttgagtcccttgccatgggaattgaatgg
ctcaatatgcaggagtttttgcagatgctgggacgtgcgggcaggcctgattaccatgac
aggggtgaggttgtgctgcttgcggtgccgaataagaaatataccagtaaccagggtgat
accgaggatgctgttgccataaagctgcttaagggagagatgcagcatataggtgtggac
tacggggaagaggagaagacagaggagatccttgctacggctgctgtgacgcattctgtg
aaagacctgaagagaatacatgcgaacatgcttgccgattatagtgtggatttcctgatc
aaaagacttgagaggtcaaagttccttcatagaaaaggtgacagtataaagctgacccgt
tttggtaagatcgcttcaggccatttcctgtcggtctcaaaggcgtttctgatacgtgat
gccgtgatgatggagcagagtcccctgacaaccgtttccaatctggagttctttgattcc
gtgtatttcaaatacgctgccagaatatctgctgccctgaacataaacctgccatccagg
gttttccagggtgcatctcttgatatactctttgagggagagaacatgcagaaactggat
atcagtctacgggaccaggtgttcgagttcgcttcggactttttgacctgcagttgcaag
gattctccctattgcggatgcgctgagcacaagttctctgagaagatcatatccatacgt
gctgaaggatatgatcccgtgggaattgtcaggaaactggagaatctctatggtgttact
gcctatcctggcgatgtgctgggttatctggacaatgttgtacgtaatctggaggccgtg
gagatgattgccagggcatattccaaaaaggatatagcctcagaggcacgcaggctgaga
aaacaggtcgaaggataa
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