Methanolobus zinderi: HWN40_09070
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Entry
HWN40_09070 CDS
T06665
Name
(GenBank) ribosome assembly factor SBDS
KO
K14574
ribosome maturation protein SDO1
Organism
mzi
Methanolobus zinderi
Pathway
mzi03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HWN40_09070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mzi03009
]
HWN40_09070
Ribosome biogenesis [BR:
mzi03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
HWN40_09070
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBDS_N
SBDS_domain_II
SBDS_C
DOP1_C
Motif
Other DBs
NCBI-ProteinID:
QLC50378
UniProt:
A0A7D5E8E7
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All DBs
Position
complement(1847230..1847922)
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AA seq
230 aa
AA seq
DB search
MVSLDEAVIARLKKGKHQFEVLVDPDGAFALNRGEDVKIEDILAVESIFTDAHQGDHAAE
SDIENTFDTTDVIEAARQILEHGELQLTTEQRKFLLEEKTKQVVTVIVQNAINPQTKTPH
PRARIEAAMEEAKVHIDLFKGVDEQVNIVMKAIRPIIPIRFEEVDIAVKIPAEYAAKSYG
DVSKFGNLVKNEWQNDGSWVAVVRMPAGLQNDFYGLVNHLTKGDVETKLL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atggtatcacttgatgaggcagtaattgcaaggctcaagaaaggtaaacatcagttcgag
gtattggtagatcccgatggagcgtttgcactgaacaggggcgaagatgttaagattgaa
gatatactcgcagtcgaatctattttcaccgacgctcatcaaggagaccatgcagccgaa
tccgacatcgagaacacctttgatactaccgatgtaattgaggccgcccgtcagatactg
gaacacggtgaactccagcttacaaccgagcagagaaagttcctgcttgaggaaaagacc
aagcaggttgtaaccgtcattgtacagaatgcgatcaacccccagacaaagaccccgcat
ccacgggcaaggatcgaggctgccatggaagaggcaaaggtccatatagatcttttcaag
ggcgtggatgagcaggtcaatattgttatgaaggccatccgtcctatcatccccatcagg
ttcgaagaggtcgatatagctgtgaagatacctgcggaatatgctgccaaatcctatgga
gatgtctccaagtttggaaaccttgtgaagaacgagtggcagaatgacggatcctgggtt
gcggttgtaagaatgcctgcgggtctgcagaatgacttctacggactggtgaaccacctg
accaaaggggatgttgaaactaaacttttatga
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