Methanolobus zinderi: HWN40_09870
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Entry
HWN40_09870 CDS
T06665
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mzi
Methanolobus zinderi
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mzi03016
]
HWN40_09870 (truD)
Enzymes [BR:
mzi01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HWN40_09870 (truD)
Transfer RNA biogenesis [BR:
mzi03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HWN40_09870 (truD)
Prokaryotic type
HWN40_09870 (truD)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruD
PH_SLA1
Motif
Other DBs
NCBI-ProteinID:
QLC50517
UniProt:
A0A7D5E9K0
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All DBs
Position
2009938..2011254
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AA seq
438 aa
AA seq
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MDIPPVEKQTGIDLYCTSVEGLGGRLRQEVDDFVVKEISNRDEGDSGKHLVIELSKSNWD
MHHLVRDMSRKLGISQKRISFAGTKDKRARTTQKISIYDIGEKEMENFHMKDVEINVIGR
SDRSVELGDLYGNEFVITIRDIDQKPEELNSHLTTIGEEIKSYGGVPNFFGIQRFGAIRP
VTHLVGEHILRGDFEKAALTYIAKSFPDEPDEVREVRDMVWEDRDFVEGLKLYPLRLRYE
RAMMHYLVENPGDYRGCFGVLSRNISRLFVHAYQSYVFNRIVCRRIEKGLPLNEAVPGDI
VCFKNKEGLPDVTRTQQVTGENVDGMNNLIRRKRAFVTAPLIGYDTEMASDEPGIIESNI
FSETGLSVNDFKVADMPDMASKGLRREILLHCEPSFQVAEDELNPGKSKATLDFTLPKGS
YATTVLREYMKVEPLKMS
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggatatacccccagtggaaaagcagacaggcattgacctgtactgcacatctgtagaa
ggccttggtggccggctccggcaggaagttgacgattttgtagtaaaggaaataagcaac
cgtgatgaaggagattccggcaagcatctcgtaatcgaacttagcaaaagcaactgggac
atgcatcatcttgtcagggatatgtcacgtaagctgggcatcagtcagaaacgcatcagc
tttgccggaaccaaggacaaaagagcaaggaccacccagaagatcagtatctacgatatt
ggcgaaaaagagatggaaaacttccacatgaaagatgtggaaataaacgtgatcggaagg
tccgacaggtccgttgaactcggtgacctttacggaaatgagtttgtgatcacgatcagg
gatatcgatcaaaagccggaagagcttaactcacatcttacgacaataggtgaagagata
aaatcctatggaggagttccgaacttcttcgggatacagcgttttggcgccatcagacct
gtgactcaccttgtaggcgagcacattctcaggggagattttgagaaggcagcgctcaca
tatatagcaaagtcattccctgatgagcccgatgaagtaagagaggtacgcgatatggtc
tgggaggacagggactttgttgaaggactcaaactctatcccctgcgcctgagatatgaa
agagcgatgatgcattatctggttgaaaatccgggagattacagaggttgctttggggtg
ctttccagaaatatcagcagacttttcgtacatgcgtaccagtcatacgttttcaacagg
atagtctgtcgccgtatagagaaaggacttccgttgaatgaagcagtacctggagacatt
gtctgtttcaagaataaagaaggtctgccggatgtcacaagaacacagcaggtaacaggg
gaaaatgttgacgggatgaataatcttatccgaaggaaaagggcttttgttactgctccc
ctgatcggctacgataccgaaatggcttccgatgagcctggaataattgaaagtaatatc
ttttccgaaaccggcctgtcagtaaatgatttcaaggtagcagatatgccggacatggct
tcaaagggacttcgcagggagatacttctccattgcgaaccttctttccaggttgctgag
gatgaactcaatcccggaaaaagcaaggcaaccctggattttacacttcccaaaggaagc
tatgcaacaacggttctcagagaatatatgaaagtggaaccgcttaaaatgagttag
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