Methanolobus zinderi: HWN40_13415
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Entry
HWN40_13415 CDS
T06665
Name
(GenBank) TATA-box-binding protein
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mzi
Methanolobus zinderi
Pathway
mzi03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mzi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
HWN40_13415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mzi03000
]
HWN40_13415
03021 Transcription machinery [BR:
mzi03021
]
HWN40_13415
Transcription factors [BR:
mzi03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
HWN40_13415
Transcription machinery [BR:
mzi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
HWN40_13415
RNA polymerase III system
TFIIIB
HWN40_13415
RNA polymerase I system
SL1/TIF-1B
HWN40_13415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-ProteinID:
QLC51145
UniProt:
A0A7D5IQR8
LinkDB
All DBs
Position
complement(2692279..2692830)
Genome browser
AA seq
183 aa
AA seq
DB search
MSDYNIKIENVVASTKLAEEFDLTKIEAEFEGAEYNKQKFPGLVYRVSDPKAAFLVFTSG
KVVCTGAKNVDDVHTVIGNMAKKLNDIGIKTIADPEITVQNIVASADLQAVLNLNAIAIG
LGLENIEYEPEQFPGLVYRIDDPKVVVLIFSSGKLVVTGGKSPENCEQGVEVVRQQLDSM
GLL
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgtcagattataacataaagattgaaaatgtagtagcatctactaaacttgcagaggag
ttcgatcttacaaagatagaggcagaattcgagggcgctgagtataacaagcagaagttc
cccggacttgtgtacagggtttctgacccaaaggctgcatttttggtcttcacatctgga
aaagtggtatgtacaggtgcaaagaatgttgatgatgttcacaccgtaatcggcaatatg
gcaaagaagctcaatgatatcggtatcaagacaatagccgatcctgagatcaccgtacag
aatattgttgcttccgcggacctccaggcagtactcaaccttaatgctattgcaataggt
cttggtctcgagaacattgaatatgaacctgaacagttccccggacttgtctaccgtatc
gatgatccgaaggtcgtagtacttattttcagttcaggtaaacttgtggttacaggcggc
aaatctcccgagaactgtgagcagggtgtcgaggtcgtaagacagcagctcgacagcatg
ggcttactgtaa
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