Candidatus Mycalebacterium zealandia: GKS04_00315
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Entry
GKS04_00315 CDS
T10121
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mzl Candidatus Mycalebacterium zealandia
Pathway
mzl00470
D-Amino acid metabolism
mzl00550
Peptidoglycan biosynthesis
mzl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mzl00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GKS04_00315 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GKS04_00315 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mzl01011
]
GKS04_00315 (murD)
Enzymes [BR:
mzl01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
GKS04_00315 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mzl01011
]
Precursor biosynthesis
Amino acid ligase
GKS04_00315 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
MurD-like_N
Mur_ligase_C
Pyr_redox
2-Hacid_dh_C
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
QMU55642
LinkDB
All DBs
Position
complement(60652..61989)
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AA seq
445 aa
AA seq
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MRVKGQKFLVVGLGKTGVAVSGFLARAGADVTATDLRDAGEITEAADLEKLGVKLRTGGH
REDVFTQARTVVLSPGVPPDIEPVRAARRADARVIGEVELSSALCGLPVVAVTGSNGKTT
TTGLIGHILKACGKKPFVGGNFGDPFINAVGNESAYDLALLEMSSFQLKTTFAFKPAVAV
LLNISPNHLDVHPDYEDYALSKKKIFANQTQDDWAVANGADTQVAAMLDNLSAKKVLFNS
ELTGEHPGCATSDGQTVFFRGEKYDLSGSKLQGRHNMENSMAAIAVASILGCEPEKTAAA
VIEFSPPPHRMEFVSDVRGARVYDDSKSTNPAAAAAALTALDKPVVLISGGKDKKTGFSA
LREPVRSKVSSLVLFGEARRAMMSELGTLTKTFAADSLQNAVEIAVSEARPGGSILFSPA
CSSFDMFSSFEERGREFKKIVKRFG
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagagtgaagggacaaaaatttctcgttgtcggtctgggcaagaccggagttgccgtt
agcggatttctagcccgcgcgggagccgatgtgacggcaactgatttaagagacgcgggc
gaaattaccgaagcggcggaccttgaaaaactgggagtgaaactgcggacgggagggcat
cgcgaagatgttttcacgcaagcccgaacggttgttttgagcccgggagttcctccggac
attgagcccgtccgcgcggctcggcgcgcagacgcccgcgttatcggcgaggtggagctt
tcttcggcattgtgcggactcccggttgttgccgttacgggctcaaacggcaaaaccacc
accaccgggctaatcggacacatactcaaggcgtgcggcaaaaaaccctttgtcggcgga
aacttcggcgacccttttatcaacgcggtcggaaatgaaagcgcttatgatttagcgttg
cttgaaatgagcagttttcaactcaaaaccacttttgccttcaagccggctgtggcggtt
ttactcaacatctctccaaaccatcttgatgtccatccggattatgaagactacgcgctg
tccaaaaaaaagattttcgcgaaccagacacaggatgactgggcggttgccaacggcgcg
gacactcaagttgccgcaatgcttgataacttgagcgcgaaaaaggttttattcaattca
gaactcaccggcgagcatccgggttgcgcgacctcggacgggcaaacggtttttttcaga
ggtgaaaaatacgacctttccggttcaaaactgcaagggcggcataatatggaaaactct
atggcggcaatcgcggtcgcttccatcctcggttgtgaacccgaaaaaaccgccgccgcg
gtaatagagttttccccgccgccgcacagaatggagtttgtgagcgatgtgcgcggcgct
cgtgtttatgacgattcaaaatcaaccaatcccgccgccgccgccgcggctctcacagcc
cttgataagccggttgttctgatttccggcggcaaggacaaaaaaaccggcttttccgcc
ctgcgcgaacccgtgcgaagcaaggtttcctcccttgtgcttttcggtgaggcgcggcgg
gcgatgatgtcggagcttggcactctcacaaaaacctttgccgctgactctcttcaaaac
gcggttgaaatcgcggtgtccgaagcgcgtcccggcggttcaatacttttctcgcccgcg
tgttcaagttttgatatgttttcgtcattcgaggaaagaggcagggagtttaaaaaaatt
gttaagagatttgggtag
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