Candidatus Mycalebacterium zealandia: GKS04_00370
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Entry
GKS04_00370 CDS
T10121
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mzl Candidatus Mycalebacterium zealandia
Pathway
mzl03410
Base excision repair
mzl03430
Mismatch repair
mzl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mzl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GKS04_00370 (recJ)
03430 Mismatch repair
GKS04_00370 (recJ)
03440 Homologous recombination
GKS04_00370 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mzl03400
]
GKS04_00370 (recJ)
DNA repair and recombination proteins [BR:
mzl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GKS04_00370 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GKS04_00370 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GKS04_00370 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QMU55652
LinkDB
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Position
72444..74162
Genome browser
AA seq
572 aa
AA seq
DB search
MKSNWLIKEQFPERSAELAREVETSPLVAQLLINRGIETGETAERFLGDSFTELPSPFLM
AGMEDAVDRIEKAVGSGEVVAVYGDYDADGVTSTSLLCDFLKALDVDTIYFAPHRIKDGY
GINSRAVEELGRRGATLIISTDCGITALDEVENAKELGIDFIVTDHHLPGDEIPDAVAVV
NPKLPGCDYPEKNIAGVGVAFNLALAVRARLREKGFFDSRTEPNMAHYLDLVAIGTVTDR
VPLTGANRIMVKEGIKRMKTPDRPGIEALKTVSRINGGFNSGDIAYRMGPRINAAGRIDG
PEIAVELLLSESAEHARTIAKKLDERNRTRQELERKAVAEAIEFIEQNPDSAQSACLVVS
SQDWHPGITGPLASRLVEKYSKPAFAIAIDSDGIGKGSGRTVPAVNLYETLRACDKSLER
YGGHAMAAGITVRSESIDLFRSEIDKHIKSTGAGTKPGEKTFRIDARIGIESLTLKTVKE
FEILEPFGSGNPTPVFLIEGAKIISHNVIKNAHLKLFLDTGEGGAPIEAMWWNAADGVAA
PEGKADIVFSPEISVWKNRESLTLRIIDLERI
NT seq
1719 nt
NT seq
+upstream
nt +downstream
nt
atgaaatccaactggcttataaaagaacagtttcctgaacgcagcgcggaactcgcgcgc
gaggtggaaacctcgccacttgtggctcaactgctcataaacagaggaatagagaccggt
gagaccgccgagcgttttttgggcgacagtttcacggagttgccgagtccttttctgatg
gcgggaatggaagacgccgttgacagaatagaaaaagcggttggcagcggcgaggtggtt
gccgtttacggcgattatgacgcggacggcgtaacctcaacctcgcttctgtgtgatttt
ctgaaagcccttgacgttgacaccatatacttcgcgccgcacagaattaaagacggatac
ggaataaactcgcgtgccgttgaggaactggggcggcgtggggcaaccctgattatctca
accgactgtggaataaccgcgcttgacgaagtggaaaatgccaaggaactgggaatagat
tttatagttaccgaccaccatctgcccggcgatgagattccggacgcggtcgcggtcgta
aacccgaaactgcccggctgcgactatccggaaaaaaacatagcaggggttggggtggct
tttaatctcgctctcgcggtgcgcgcgcgactgcgcgagaaaggtttttttgacagcaga
accgaacctaacatggctcattatctggatttggttgccataggcacagtaacggacagg
gttccgctcacgggcgcaaacaggattatggtcaaagagggaatcaagagaatgaaaacc
cctgacagacccggaattgaggcgctgaaaacggtcagcaggataaacggaggattcaat
tcgggcgacatcgcttacagaatggggccgcgcataaatgcggcgggcagaatagacgga
cccgaaatcgcggttgagcttctgctgtccgaaagcgcggaacacgcacggacgatagca
aaaaaactggatgaacggaacagaacccgacaggaacttgagcgcaaagcggttgccgaa
gcgattgaatttatagagcagaatccggacagcgcgcagtccgcctgccttgtggtttct
tcgcaggactggcatccgggaatcacgggccctctcgcctcgcggcttgtggaaaaatac
tccaaacccgcgttcgccattgcaatagactcagacggaatcggcaaaggctccggcaga
acggttccggcggtcaacctttatgaaaccttgcgagcctgtgacaagtcgcttgaacgc
tatggcgggcatgcgatggccgcagggattaccgtgcgaagcgaaagcatagacctgttc
cgctccgagattgacaagcatatcaaaagcaccggcgcgggcacgaaaccgggagaaaag
accttccgcatagacgcacgcatcggcattgagagtttgaccctcaaaaccgtcaaggag
tttgaaatccttgagccgttcggaagcggcaaccccacgccggttttcctgattgaaggc
gcgaaaatcatttcacacaacgtcatcaaaaacgctcaccttaaactttttctggacacg
ggcgaaggcggcgcccctattgaggcaatgtggtggaacgccgcggacggagttgctgcg
cccgaagggaaagcggacatagtgttttcgcccgaaatctcggtatggaaaaacagagag
tccctcacactcaggattatcgaccttgaaaggatataa
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