Candidatus Mycalebacterium zealandia: GKS04_02740
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Entry
GKS04_02740 CDS
T10121
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
mzl Candidatus Mycalebacterium zealandia
Pathway
mzl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mzl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GKS04_02740 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mzl03400
]
GKS04_02740 (uvrB)
DNA repair and recombination proteins [BR:
mzl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GKS04_02740 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GKS04_02740 (uvrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
FAM192A_Fyv6_N
UB2H
AAA_30
AAA_16
Motif
Other DBs
NCBI-ProteinID:
QMU56093
LinkDB
All DBs
Position
561402..563414
Genome browser
AA seq
670 aa
AA seq
DB search
MSGFKLHSEFTPAGGQPEAIEQIVSRLEDGISDQVLLGVTGSGKTFTIANAIARANRPAL
ILAHNKILAAQLYGEFRELFPDNAVHYFISYYDYYQPEAYIPHSNTYIEKDVAINDHIDK
MRHAATTALFERRDIVVVASVSAIYGIGAPEDYYGMMNFIEVGARTERDVFLSKLADIQY
KRSNDALERGAFRVRGDVVEVMPSHGDNEVVRVEFFGDEVDSVNVIDHETGSVVRAIEKA
SFYPASHYVAPRDKMLAAVDAIKSELDERVEYFGARSMSDERDRIAERTRRDIEFLETMG
FCPGIENYSRHLAGRNEGEPPFTLLDYFPDDFICVIDESHQTVPQIRGMHAGDRSRKKTL
VEHGFRLPSAIDNRPLNFEEFTEKKGQTIYVSATPAEYEIEKSLGQVAEQMIRPTGLADP
DVEVRPARGQVDDLLGEIRKVANAGERVLISTLTKKMAEDLTDYYRDAGVRVRYMHSEIE
TLERVRIIHDLRSGEFDALVGINLLREGLDIPEVALFAVLDADREGYLRSETSLIQMFGR
AARNIKGRVIMYGDEVTGSMKAAMNETERRREIQTQYNKDNGITPSAIRKNLQGAMGLVC
EADYVDASAEAVLSGEIAPEEIPGTIKSLTRKMKKSAKDLEFEKAASLKKRIKKLKDMEA
EYIAGMKNHR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
ttgagcggcttcaaacttcacagtgaattcacacccgccggcgggcagcccgaagcgata
gaacagattgtttcgcgacttgaagacggtatttcagatcaggttctgctcggtgtaacc
ggtagcgggaaaaccttcacaatcgccaacgccatcgcgcgcgcgaaccgccccgcgctt
attctcgcgcataataaaatcctcgcggctcaactctacggcgagttccgtgagctgttt
cccgacaacgccgttcactacttcatcagttattacgactactatcagcccgaagcgtat
attcctcacagcaacacatacattgagaaagatgtcgcgattaatgatcacatagacaaa
atgcgccacgcggcaaccaccgcgctttttgagcggcgcgacattgttgttgtggcgagc
gtgagcgcgatttacggcattggcgcgccggaggactactatggaatgatgaattttatt
gaggttggcgcgagaacggaaagggacgtttttctgtcaaaactcgccgatattcaatac
aagcggagcaatgacgctcttgaaaggggcgccttcagggttcgcggcgatgttgttgaa
gttatgccttcgcacggcgataacgaagtggtgagagttgagtttttcggtgatgaggtt
gattccgtgaacgtgattgaccatgaaacgggctcggttgtacgagcgattgagaaagcg
tctttttatccggcgtctcactatgtcgcgcccagagacaaaatgcttgccgccgtggac
gcaattaagtcggagttggacgaaagggttgaatacttcggggcgcgctcaatgtctgat
gagagagacagaatagccgagcgcacacgcagagatattgagtttcttgaaactatgggc
ttctgccccggaatagaaaactattcgcgccacctcgcgggcagaaacgaaggcgagccg
ccgttcacactacttgattattttccggatgatttcatctgcgtgatagacgaaagccac
caaaccgttccacagattcgcggcatgcatgcgggagacagaagccgcaaaaaaacgctt
gttgaacatggcttccggcttccgtccgcgattgacaaccgtccgctcaattttgaggag
ttcacggagaagaaagggcagacaatttatgtttcggcgactccggcggagtatgaaatt
gaaaaatcgcttgggcaggtggcggaacagatgatccgtcccacggggcttgccgacccg
gatgtggaggtcaggcccgcgcgcggacaggttgacgatttgctcggcgaaatccgtaaa
gtcgcaaacgcgggtgagcgggttcttatttccacactcacaaagaaaatggctgaggat
ttaaccgattattacagagacgcgggcgtgcgggtgcgctatatgcattcggaaattgag
actcttgagcgggttcgcataattcacgatttgcgctccggtgagtttgacgcgcttgtg
ggaatcaaccttctgcgcgaggggctggacattcccgaagtcgctctgttcgctgtgctt
gatgcggacagggaggggtatttgcgcagtgaaacatctttgattcagatgttcggcaga
gccgcgaggaacataaaaggcagagtaataatgtacggcgatgaggtaacgggctcaatg
aaagcggcgatgaacgaaactgaacggcgcagagaaatccagactcaatacaataaagat
aacggcataacgccatccgcgataagaaaaaaccttcaaggcgcgatggggcttgtatgt
gaggcggactatgttgacgcttcggccgaagcggttttgtccggtgaaatcgcgccggaa
gagattccgggcacgattaagtcgctcacccgaaagatgaaaaaaagcgcgaaagaccta
gagtttgagaaggcggcatctttaaaaaaacgcatcaaaaaactcaaagatatggaagcg
gaatatatcgccggaatgaaaaaccaccgctga
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