Candidatus Mycalebacterium zealandia: GKS04_03380
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Entry
GKS04_03380 CDS
T10121
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mzl Candidatus Mycalebacterium zealandia
Pathway
mzl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mzl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
GKS04_03380
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzl03019
]
GKS04_03380
03009 Ribosome biogenesis [BR:
mzl03009
]
GKS04_03380
04131 Membrane trafficking [BR:
mzl04131
]
GKS04_03380
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mzl04147
]
GKS04_03380
Messenger RNA biogenesis [BR:
mzl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
GKS04_03380
Ribosome biogenesis [BR:
mzl03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
GKS04_03380
Membrane trafficking [BR:
mzl04131
]
SNARE
SNARE associated proteins
Others
GKS04_03380
Autophagy
Aggrephagy
Other aggrephagy associated proteins
GKS04_03380
Exosome [BR:
mzl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
GKS04_03380
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_33
RuvB_N
AAA_5
TIP49
AAA_2
AAA_22
AAA_16
AAA_14
nSTAND3
AAA_18
AAA_17
AAA_28
Mg_chelatase
AAA_lid_PRS2_C
Viral_helicase1
IstB_IS21
NACHT
NPHP3_N
ABC_tran
Zeta_toxin
RNA_helicase
TsaE
AAA_7
nSTAND_NTPase5
Sigma54_activ_2
CDC48_2
Parvo_NS1
AAA_3
AAA_24
NB-ARC
SLFN-g3_helicase
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QMU56207
LinkDB
All DBs
Position
complement(682819..685014)
Genome browser
AA seq
731 aa
AA seq
DB search
MYYLFFTKMISLKISEIDCSDMGKGVAKLSRNNMHELGLEPFDTIEIGGKRKTVARAVPL
ETEDGTNENIIEIDSFTRRNARSEINDFVIVRKSSFETAKRVTVAVSDKTVLYERKKGMD
AILSSLLGLALTKGDRVGMSSNGKAGNSSKTAGEIYVISAVPSSPNPIVIDETTEITIAK
LPANMEENRDKTRYARIGGLKKQINKIREIVEIPVRFPEVFARLGIEPPRGILLIGPPGS
GKTMLAKSAIHETGMNFQIVNGPEIISKHYGESEARIREIFETAQKKQPSIVFLDELDAI
APHRDKVAGEVEKRVVAQLLTMMDGLEKKGNVIVIGATNLPDLIDPALRRAGRFDREILL
DVPDSLSRIEILKIHCEAMPLSKDVDFQRIAELTNGFTGADIEMLCKEAGLKALGGFLEE
FDGNGYETKTAKKNKKKNGEISVSMENFTDALKEVEPSAIREISVDIPETGLESIGGLKE
IKNTLFESVIMPLRHRELYKTAEVTPPRGIMLCGAPGTGKTLIARALANECGVNFISIKG
AEMLSKYVGESERAIRNVFSKARQVAPSIIFFDEIDALAPVRRESEGNRVSEQVVSQMLA
EMDGIEELSDVQVLAATNRRDIVDPALMRSGRFDLILNIPLPDRESIEEILKIHIGGKPL
AKNVNFKTLAAKMKGMSGADVKLVCDKSSIFALNEQIKKRDGKTFRITNSHFLKSLKEVS
EKSAAPARRGG
NT seq
2196 nt
NT seq
+upstream
nt +downstream
nt
atgtattatttatttttcacaaagatgatctcgctgaaaatatcagaaatagactgtagc
gacatgggcaaaggagttgccaaactcagccgcaacaacatgcatgagctgggacttgag
ccgtttgacaccattgaaatcggcggaaaaagaaagacggttgccagagccgtgcccctt
gaaaccgaagacggaacaaacgaaaacataattgagattgattcattcacccgccgcaac
gcccggtcggaaatcaacgattttgtgatagtaagaaaatcgtcctttgaaaccgcgaaa
cgcgttacggtggcggtttcggacaaaaccgttctctacgaaagaaaaaaaggcatggat
gcgattctttcaagcctccttggtctcgcgctgacaaagggtgacagggttggaatgtcg
tcaaacggcaaagccgggaactcgtccaaaacagccggggaaatctatgtcatcagcgcc
gtgccctcctcgcccaatccaattgttatagatgaaacaaccgaaatcacaatcgcgaaa
cttcccgctaacatggaggagaaccgcgacaaaaccagatacgcacggatcggagggctg
aaaaaacagataaacaaaatccgcgaaattgttgaaatacccgtccggtttcccgaagtt
ttcgcccgccttggaatagagccgccgaggggaattctgctcatcggtccgccgggaagc
gggaaaacgatgctcgcgaaatcggcaattcacgaaacaggaatgaattttcagattgtg
aacgggcccgaaatcatcagcaaacactacggtgaaagcgaagcgcgaataagggagata
tttgaaaccgcgcagaaaaaacagccgtccattgtttttcttgatgagttggacgccatc
gctccgcacagggacaaagttgccggagaggtggaaaaaagagtggtcgcccagttgctt
accatgatggacgggctggagaaaaaaggcaatgtcatagttatcggagccactaacctt
ccggacttgattgaccccgcgctgcggcgcgccggcaggtttgacagggaaatactgctt
gatgttcccgacagtctgtcaagaattgaaatcctgaaaatccactgcgaagcgatgccg
ctttcaaaggatgttgattttcaacgcatcgcggaattgaccaacggcttcaccggcgcg
gacattgaaatgctgtgcaaagaggcggggctcaaagcgcttggcgggtttcttgaagag
tttgacggcaacggatacgaaacaaaaaccgcgaaaaaaaacaaaaagaaaaacggcgaa
atttctgtctcaatggaaaacttcacagacgcgctcaaagaggttgagccgtccgccata
cgggaaatctcggtggatattcctgaaaccggacttgaaagcataggcggactaaaagag
ataaaaaacacactttttgaatccgtgattatgccgttgcgccacagggaactctataaa
accgccgaggtaaccccgcccagaggcataatgctgtgcggcgctcctggaacgggaaaa
actcttattgcaagagcgctcgcgaacgaatgcggagtcaatttcatctcgattaaaggc
gcggagatgctttcaaaatatgtcggcgaatccgagcgtgcgatacgcaatgttttctca
aaagcccgtcaggttgctccgtcaataatcttttttgacgaaattgacgcgctggctccg
gtcagaagagaatccgaaggaaacagggtttccgagcaggtagtgagccagatgcttgcc
gagatggacggcatagaagagctttcggatgtgcaggtgctcgcggcgacaaaccgcaga
gacatagttgaccccgcgcttatgcgctcgggcaggtttgacctcattctcaacataccg
cttccagaccgcgaaagcattgaggaaattctgaaaattcacatcggcggcaaaccgctc
gcaaaaaatgtgaacttcaaaacactcgcggcaaaaatgaagggaatgtccggggcggat
gtaaaacttgtgtgcgacaaatcttctatcttcgcgctaaatgaacagattaaaaaacgc
gacggaaaaaccttccgtataaccaattcacacttcctgaaaagtttgaaggaagtcagt
gaaaagagcgcggctcccgcgcggcgaggcggttaa
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