Candidatus Mycalebacterium zealandia: GKS04_03995
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Entry
GKS04_03995 CDS
T10121
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
mzl Candidatus Mycalebacterium zealandia
Pathway
mzl03020
RNA polymerase
Brite
Enzymes [BR:
mzl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GKS04_03995 (rpoC)
Transcription machinery [BR:
mzl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GKS04_03995 (rpoC)
DNA repair and recombination proteins [BR:
mzl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GKS04_03995 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QMU56315
UniProt:
A0A7D7ZDR8
LinkDB
All DBs
Position
complement(803474..808459)
Genome browser
AA seq
1661 aa
AA seq
DB search
MRKWQNCSLERQNSNREVKMEFEDIVSTKADNYSGVQISIASPEAIKEWSHGEVKKPETI
NYRTFKPEKNGLFCPKIFGPVKDYECACGKYKRLKHRGIVCEKCGVEVTTSKLRRERMAH
IDLASPVVHIWFLRSTPSRIGMILDMSIRDIDRVLYYESHVVINPGAHPLKMGQTLTNEE
LSQLRRAEYVIASLRNCPEEDTFLNIETEEDVNHAVAFLISEEDMSLVKDYWYKHLLPAE
LVTKFSLQSVMSGKTGISEREARHLIDSFLDAKKDLKKEQSAYDAKVSESGELESGGKLK
EARDSFQSIKKEFEQKFAKHYQTLGLEELPSSDKKIRDAFKQLSETGKADKEALGASCDN
LTKGDAGKEHAALRKLYKEAGKNIKKVEADAEEVPPHLKDAHEKLVKAREGLKKSQTAFA
KIIRKVTFTEKEIKTLTEADESFEVDYTYGMGAEAIYDMLKSIDLKSLSEELKTEMQESS
SSLKKAKIAKRRKICETFRKSKNRPEWMVLKTIPVLPPDLRPLVPHGGRFATSDLNVLYR
RVINRNNRLKRLLELDAPDIIIRNEKRMLQEAVDALFENGRRGRPVLGHNHRPLKSLTDI
IKGKSGRFRQNLLGKRVDYSGRSVITVGPNLKLHQCGLPKQMALELFKPFIYQKLQELKN
KDGSPIAPTIKIAKKFVETGVPVVWDALDDVIKEHMVMLNRAPTLHKLSIQAFEPVLVED
RSIRVHPLVCPAYNADFDGDQMAVHLPLSIEAQAECRTLIMSTNNILSPAHGKPVILPTQ
DIVLGIYYMTKDSAYSKGEGKYFSSPEEVMMAYDSGHVGIHTLIKIKINDELVETTVGRA
ILYDEAIPKTIPFKLVNKPMSKGEVENLVDMCFRKNGGKETVIMADRIKTLGFKYATKSG
ISISINDMEIPESKEKIVEKAREEELKVQGQYSQGLLTDGERYNKVVDIWTRASDEIAEN
VMENIKFETVKDNKGVERTSTSSNPIYMMIDSGARGSMSQMRQLAGMRGLMAKGDDTIIE
KPITSNFREGLKVMDYFLSTYGARKGLADTALKTANAGYLTRKLIDVAHDIIVREEECGT
IEGLVYTNEVDGGKIKKRVGDRVLGRVVLDDLKDPETGEIIVKNGHEIDNEAAEKINLSS
INEVKIRSVLTCDTEEGICRLCYGRNLSTGKIVDIGEAVGIMAAQSIGEPGTQLTMRTFH
VGGEAKAEVATLENNHPGTVLLSNVETVELQKGVLWRVINRNGRLSIVDEKGYEKETHKL
EQGSILKAKDGQKVKWEQNKKDGKVENEILAEWDPYTNQYIAESTGTVQWKDLEEGKNFR
QQPDEITGILKIEVVAPPTGIKELAKLNPTIIIKSGKDSKQEFGLPVGAIIEKNSGDQVE
PGDIVAKIPKKRITKDITGGLPRVAELFEARVPKDKNLAIVSEIDGTVSFGEDVKGKRRI
LVNPQIGEEKEYIVPKGKHIIVSEGDFVVAGDKIVDGDENPHDILKIKGEKTLSEFLVKE
IQDVYELQGVRVNDKHIEVIVRQMLKRVKIKDPGDTTMIPGESVTKAMFHRENSEVEQQE
GKSAAAEPLLLGITRSSLITESWLSAASFQETTKILTEAACESKEDKLKGLKENVIIGKI
IPAGTGLDVYKNIKIQTENQTVPMPLVEEAKSEKLEEKSGV
NT seq
4986 nt
NT seq
+upstream
nt +downstream
nt
atgaggaaatggcagaattgcagtctggagcggcaaaacagtaaccgggaggtaaaaatg
gaatttgaagacatagtatcgaccaaagcggataactattcaggggttcaaatatcaata
gcgtctcctgaagccatcaaggaatggtctcacggggaggttaagaagcccgaaaccata
aattacagaacgttcaaaccggaaaagaacggtttgttctgccccaaaattttcggaccc
gtaaaagattacgaatgtgcctgcggcaaatacaaacggctaaaacacagagggattgtc
tgcgaaaaatgcggcgttgaagttacgacctcaaaattgagacgggaaagaatggctcac
atagaccttgcctcgcccgttgttcacatctggtttttgcgtagcaccccgagccgtata
ggaatgattcttgacatgagcatcagggacattgacagggttctttactatgaatcccat
gtggtcatcaatccaggcgctcatcccctcaaaatggggcagacactcacgaatgaagag
ttgtcgcaactgcggcgggcggaatatgtgattgcctctctcaggaattgtccggaagaa
gacactttccttaatattgaaaccgaagaggacgtaaaccacgccgttgcgtttttgatt
agcgaagaagacatgtctctggtcaaagactattggtataaacaccttctgcccgcggaa
ctggtcactaaattttccctgcaaagtgttatgtcgggaaaaacaggcatttccgagcgg
gaagcccggcatttaatagactcttttctggacgcgaaaaaggatcttaagaaagagcag
tccgcatatgacgcaaaagtgtccgagtcgggcgaacttgagtccggaggaaaactcaaa
gaggcgcgggacagttttcagtccattaaaaaggaatttgagcaaaagttcgcgaaacac
taccaaaccctcggacttgaagaacttccctcaagcgataaaaaaattcgggacgctttc
aaacagctttctgaaaccggaaaagcggacaaagaagccctcggcgcttcctgcgacaac
cttacgaaaggtgatgccggaaaagagcacgccgcgctacgcaaactttataaggaagcc
gggaaaaacataaagaaagtggaagccgatgcagaggaagttcctccgcatctcaaagac
gcgcatgaaaaactcgtaaaagcgagagaagggttgaaaaaatctcagaccgccttcgcc
aaaattataagaaaagtgacctttaccgaaaaggaaattaaaactcttaccgaagcggat
gaaagttttgaggttgactacacatacggaatgggcgccgaagccatttacgatatgctc
aaaagcattgatttgaaatcactttccgaggagttgaaaacggagatgcaggaatcaagt
tcttcgctcaaaaaggcaaagatcgcgaaaaggcgcaaaatttgcgaaactttccgcaag
tcaaaaaaccgccctgagtggatggttcttaaaacaattcccgttctaccgccggatttg
cgtccgcttgttccacacggagggcgtttcgccacttcagacctcaatgttctctacaga
cgggtcatcaacagaaataaccgcctgaaacggttgcttgagctggacgctcccgacatc
atcatcagaaatgagaaaagaatgttgcaggaagcggtggatgcactgtttgaaaacggc
agaaggggaagacctgttctaggccacaaccatcgtccgttgaaaagtttgaccgacatc
ataaaaggcaaaagcggcagattccgccagaaccttctcggaaaaagggtggattattca
gggcgttccgttattacggtgggaccgaacctcaaacttcaccagtgcggacttcccaaa
cagatggcgcttgagcttttcaagccgttcatttatcagaaactgcaggaactcaaaaac
aaagacggcagccccattgcgccaacaatcaaaatagcaaagaaatttgttgaaaccggt
gttccggtggtatgggatgcccttgatgacgtgattaaagagcacatggttatgcttaac
cgcgctccgacccttcacaaattaagtattcaagcgtttgagccggtgcttgtggaagac
aggtctatcagggttcatccgcttgtctgtcccgcttataacgcggactttgacggcgac
caaatggccgtccacctgcctctgtccatagaggcgcaagccgaatgccgcacgcttata
atgtccacaaacaacatactttcccctgcgcacggcaagcccgtaattctgcccacgcag
gacattgttctcggaatctactacatgaccaaggattccgcttacagcaaaggggaaggc
aaatacttctcatcgcccgaagaggtcatgatggcatacgattcggggcatgtcgggatt
cacactctgataaaaatcaaaatcaacgacgagcttgttgaaacaacagttggcagagcg
attctatacgatgaggcaattccgaaaaccattccgtttaaactggtcaacaaacctatg
agcaagggcgaagttgaaaaccttgtggatatgtgttttagaaaaaacggcggaaaagaa
accgttattatggcggaccgcataaagactcttggatttaaatacgctacaaaatccggc
atctcaatttctattaacgacatggaaattcccgagagcaaggaaaagattgttgaaaag
gcgcgcgaagaggaactcaaagttcaagggcagtattctcaagggttgctgacggacgga
gagcgttacaacaaggttgtggacatctggacaagagcgagtgatgaaattgccgaaaat
gttatggaaaacatcaagtttgagaccgttaaagacaacaaaggcgtcgaaagaacaagc
acaagctcaaacccgatatacatgatgattgattccggagcacgaggtagcatgtctcag
atgagacagcttgccggaatgaggggattgatggcgaagggagatgacaccattattgaa
aagcctataacctcaaacttccgtgaagggttgaaggtgatggactactttctttcaacc
tacggcgcacgtaaaggtcttgccgacaccgctcttaaaacagcaaatgcgggctatctc
acgagaaagctcattgatgttgcgcatgacataattgtgcgcgaggaagaatgcggaacc
attgagggacttgtttacacaaatgaagtggatggcgggaaaattaaaaaacgggttgga
gacagagtgctcggaagggttgttctggacgacttgaaggatccggaaacaggtgaaatc
attgtcaaaaacggacatgaaatcgacaacgaagctgctgaaaaaattaacctgagcagt
atcaatgaagttaaaatccgctcggttctgacctgcgacaccgaagagggaatatgccgt
ctttgctacgggagaaacctctcaacaggaaaaatcgtggatataggcgaggcggttgga
attatggcggctcagtcaatcggcgagccgggaactcagcttacgatgagaacttttcat
gtgggcggagaggcaaaagccgaagtcgccactcttgaaaacaaccaccccggaaccgtg
ttgctgtccaatgtggaaaccgttgaactacagaagggtgttctgtggcgcgttattaac
agaaacggccgtctttccattgtggatgaaaagggctacgagaaggaaacacacaaactt
gagcagggctccatcctgaaggcaaaggacggacagaaggtcaagtgggagcagaacaaa
aaggatggaaaggttgaaaatgaaatccttgcagagtgggatccttatacaaaccagtat
atcgccgagagtacgggaacagttcagtggaaggatctggaagagggcaaaaacttccgc
cagcaaccggatgagattaccggaattctcaaaattgaggttgtcgctcctccgacgggc
atcaaggaacttgcgaagctgaacccgactatcattatcaagagtggtaaagattccaaa
caggaattcggtcttcccgtgggcgcgatcattgagaaaaatagtggcgaccaagtagag
cccggagacattgttgcaaaaatcccgaaaaagaggataacaaaagacataaccggcgga
ctgcccagagttgccgaactatttgaagcgcgcgttcccaaagataaaaacctcgcgata
gtaagcgagattgacggcaccgtatctttcggggaagacgtgaagggcaaaaggcgcatt
ctggttaatccgcaaatcggagaggagaaggaatatattgttccgaaaggaaaacacatc
attgtcagtgaaggcgattttgtagtcgcgggcgacaaaatcgtggacggagacgagaac
ccgcatgacattctgaaaattaaaggggaaaagacgctcagcgaattccttgttaaggag
attcaggatgtttacgagttacagggagtcagggtcaatgacaagcacattgaggtgatt
gtcagacaaatgctcaaaagagtgaagattaaagaccccggagatacaacaatgattcca
ggcgagtccgtaacgaaagccatgttccatagagagaactctgaagtggaacaacaggaa
ggcaaatccgccgccgccgaacctttgttgctcggaataacgcgctcttctctcatcact
gaaagttggctgtctgcggcgtctttccaggaaacgacaaaaattctcaccgaagccgcc
tgcgagagcaaagaggacaaactcaaagggctgaaagagaatgttattatcggaaaaatc
attcctgccggcacgggtcttgatgtgtataaaaacatcaaaattcagactgaaaaccaa
accgttcctatgcctcttgtggaagaagccaaatctgaaaaacttgaagaaaaatcggga
gtatag
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