Candidatus Mycalebacterium zealandia: GKS04_05880
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Entry
GKS04_05880 CDS
T10121
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
mzl Candidatus Mycalebacterium zealandia
Brite
KEGG Orthology (KO) [BR:
mzl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
GKS04_05880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzl03021
]
GKS04_05880
Transcription machinery [BR:
mzl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GKS04_05880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r1_2
Usp-48
Motif
Other DBs
NCBI-ProteinID:
QMU56640
LinkDB
All DBs
Position
complement(1144931..1146364)
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AA seq
477 aa
AA seq
DB search
MKVAQAGREEGEFYGEQTSDAAPVQDAKGGALDRDPMRTYLQDISMHPLLKRQQEIKVAK
DLEKSKERVAQAILSCDFMKREFCFGENVDLLALGKKEVEKNRYKTMFATLAGYIEQGVE
IEKKIGKMKQSGEKLRAFSRRKARNIKKKVEVIKDMNRQNNLLFKHRLEAVEQTVADILS
EIDEKSALHKSTRSRKRKDECGKILAKLRKQFSSQKQDEVAASLSALRASCYDVSENRKR
LVEANLRLVVSIANKYKNRGLPLLDLVQEGNIGLRHSVDVFEYRRGNKFSTHASWWIMQA
ITRAIAEQSRVIKIPVNVVENVSKIYKTKRALSQKMRKSPSIEDIADKLDQTPGEVSKTI
GLANDTLSLDIPVGNEDYSSNSIMDFVEDESPDNRSSEIFEKEEFREIVHKALKVLKPNE
EKVIRMRFGIGEEKEHTLEEIGRQIGITKERVRQIEVESLAKLKRSSRKSQIRLYVD
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgcccaagcggggcgtgaagagggagagttttacggggagcaaacatcggac
gctgcgcccgtgcaggatgccaaaggaggggcattggacagagacccgatgcgtacctat
ctgcaggacatcagcatgcatcctctcctgaaaaggcaacaggaaatcaaggttgccaaa
gaccttgaaaagtcaaaagagagagttgcgcaggcaattctgagttgtgattttatgaag
cgcgaattttgcttcggtgaaaatgttgaccttctcgcgctcggcaaaaaagaggtggag
aaaaaccgttacaaaacgatgtttgccacacttgccggatacatcgagcaaggcgtggaa
atagagaaaaaaattggcaaaatgaaacaatccggcgagaagctcagggcgttctcgcgc
agaaaagcgcgcaatattaagaaaaaagtggaagtcatcaaggatatgaaccgccagaac
aaccttttgttcaaacaccgccttgaagcggttgagcagactgtggcggatattctttcc
gagattgatgaaaaatccgcgctgcataaatccacacgctcccgcaaacgcaaagatgag
tgcgggaaaattctggccaagctccgcaagcagttttcttcgcagaaacaggacgaagtt
gcagcttctctgtccgctttgcgcgcctcgtgctatgatgtttcagagaacagaaaaagg
cttgttgaagcaaacctgcgtcttgtcgtgagcatagcgaacaaatacaaaaacaggggc
ttgccgctccttgatttggtgcaggagggaaacatcgggctcaggcattcggtagacgtg
tttgaataccgcaggggcaataagttttcgactcacgcgagctggtggataatgcaggcg
ataacgcgtgccattgccgagcagtcgagggtgataaagattcccgttaatgtggtggaa
aatgtcagcaagatatacaaaacaaagagggctttgtctcagaaaatgaggaagtctccg
tcaattgaggacatagcggacaaacttgatcagactcccggcgaggtttctaaaacgata
gggctcgcaaatgacactctctcgcttgatattccggttggaaacgaggattacagtagc
aactcgataatggactttgttgaggacgaaagtccggacaaccgttcgtctgaaattttt
gaaaaagaagagtttcgggagattgtccacaaggcgctaaaagttctcaaaccaaatgaa
gagaaagtgattcgcatgcgtttcggtatcggtgaagaaaaggagcacacccttgaagaa
atagggcggcagattggaattacaaaggaaagagtcaggcagatagaggttgaatcactc
gccaaactgaagagaagcagcagaaaatcgcaaatccgtctctatgtggattga
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