Mycetomoellerius zeteki: 108721541
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Entry
108721541 CDS
T11078
Symbol
Col4a1
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt04382
Cornified envelope formation
mzt04512
ECM-receptor interaction
mzt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108721541 (Col4a1)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108721541 (Col4a1)
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
108721541 (Col4a1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mzt04147
]
108721541 (Col4a1)
00536 Glycosaminoglycan binding proteins [BR:
mzt00536
]
108721541 (Col4a1)
Exosome [BR:
mzt04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
108721541 (Col4a1)
Glycosaminoglycan binding proteins [BR:
mzt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108721541 (Col4a1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
108721541
NCBI-ProteinID:
XP_018301639
LinkDB
All DBs
Position
Unknown
AA seq
1876 aa
AA seq
DB search
MTRLGLRFVASAVCLAGIVSGQLNHTSWSILPPVVPLERGDIGRPTNGSDDDYGSSPDFK
YLGKGFITDNEGYEDAERRNGSFTSGNYSPDERAYPSFFWNRNRSDPHGQSSSGRSPYDR
ASPNYDRYPDSGGTPGSGIDENRPGSYPDGHGDYDTYSGAGESERGGGSYNYGQGGSDDS
YSNSYGGTYGAGSADPYGRGSGSAYGGSRGSGQVYGGSRGSDDSYGGGRGRGHGGYGAAG
DDENYPSNYQVVPMPGASRNCTGSGCCAPKCFAEKGSRGPPGIIGPQGPKGQRGFPGAEG
LLGPKGEKGDPGPQGPHGAKGDRGKMGMPGFPGINGVPGVQGSPGSPGVPGHDGCNGTDG
ERGRDGVPGEPGPRGLRGLPGSKGEKGQPAYAGAFPVGQKGEPGMDGVRGPPGPPGYQGE
RGLSGSKGERGPYGAPGILGPKGEKGNMGLGFEGLKGDKGQKGDPGPPGSTAPIMPFQQG
ISQVTGPPGEPGYKGDKGEMGPEGQKGEPGFIGDHGIPGGLGQKGEKGLPGAPGIRGRDG
FSGPPGPPGRKGDRGIDGLEGLAGRSGKKGEPGRDGTMGVSGLRGPPGPPGGGKGRPGPP
GPKGPRGFPGPTGPRGADGFPGDPGPRGPIGLQGGPGSSGIPGPEGLPGEKGGKGEPGLT
GFPGGPGPRGFDGPPGAVGPRGPLGDKGYSIMGPKGVDGTPGLDGEKGQKGERGYAGVRG
RPGDSLDGIPGAPGAPGEPGEAGAPGRDGVPGLSGASGEKGDIGGRCIDCIPGLRGAKGD
RGFDGAPGLTGPRGPPGERGFPGEAGVDGLPGTIGPPGLPGKDGIPGAPGPQGEPGTPAT
VTWNMLKLEKGDKGARGEPGRQGPPGPEGPLGEKGRPGFEGFPGLKGTPGDRGFPGQDGV
PGRPGTPGRKGEKGLSVKGESGESGRPGSPGQKGEPGLYGLKGEPGQCPPLDLMKGFKGD
RGLTGDKGEPGPPGRDGLPGDKGLQGFSGPPGTSGPIGAPGPVGPRGLPGPRGDKGNMGP
MGFPGELGREGPRGFPGAPAPKGEKGESGISVKGSPGLTGPPGEKGEKGLPGPPGKEGPR
GYQGLAGFVGEKGDMGPPGINGLPGAPGAKGDTGLIGPPGPPGVAGIPGADGIKGEPGLP
GEPGRAGLPGFPGAKGDRGEPGIDGPKGYPGRRGLPGTPGRDGIDGAKGESGKPGIGDDG
LPGLKGEPGIPGRDGLPGFQGQKGDTGVRGFPGIKGDYGPPGIPGEPGPPGIDGLPGEVG
EIGSQGVPGFPGIDGEMGSPGRPGLDGIKGDRGLQGLVGLPGIQGAIGEKGDRGPSGPTI
QIKGEKGEPGIPGFSGEKGEKGNQGITGITGYDGEKGDRGLSGLDGSPGPHGTPGPKGEQ
GPAGIPGVPGVTIKGEKGLPGLLGKHGRDGFPGRPGEKGEPGLPGLPGPKGDIGPYGPVG
PQGEKGDQGPSGLTGSPGRDGSPGLEGAPGLPGERGQKGDQGPPGLFGAPGQKGESGFPG
PNGLDGPQGEKGERGWDGVNGLPGPIGEKGDRGYPGTVGLMGSVGYEGQKGEKGEDCLEP
PMGPKGDRGYPGSPGPSGPQGGKGLPGPPGFSGADGIKGAQGFIGSPGPAGLPGLPGPVG
APGLLGLQGPVGAPGLIGEPGAPCETTPDYLTGILLVKHSQSQSVPICEPGHIRLWEGYS
LLYTDGDERAHSQDLGYAGSCVRKFSTIPFLFCDVNNVCHYASRNDRSYWLSTNRPIPMM
PVEEAAIEEYISRCVVCEVPANVIAVHSQTISIPECPAGWTGLWIGYSFVMHTGAGSQGG
GQSLSSPGSCLEDFRATPFIECNGAKGHCHYYSNQFSFWMVTIEDGQQFRSPEKQTLKAG
NLRSRISRCQVCIKNT
NT seq
5631 nt
NT seq
+upstream
nt +downstream
nt
atgacccggttgggattgcgattcgtcgcatccgcagtctgcctggccgggattgttagt
gggcaattaaatcacacatcatggtcgattctaccaccggtcgtgccgctggaacgaggt
gatatcggaaggcctacaaacggtagcgatgatgactacggcagttcgccagatttcaaa
tatttaggcaaagggtttattacggacaacgaaggatacgaggatgcggaaaggcggaac
ggcagtttcacgtctggtaattacagtcctgacgaaagggcctatccgtcattcttttgg
aacagaaacagaagcgaccctcacggtcaatcttcctcgggccgatctccttacgataga
gcatcgccgaactatgacaggtatcctgacagcggcggcacgccaggatccggaattgac
gaaaatcgaccaggcagttaccccgatggtcacggcgattacgatacatacagtggtgca
ggtgaaagcgagcgaggaggaggttcttataattatggtcaaggaggttctgatgattct
tatagcaatagttatggaggaacttatggtgcaggaagtgcggatccctatggtcgtgga
agcggaagtgcttatggtgggagtcgcggaagtggacaagtttatggcggcagtcgtgga
agcgatgactcttacggtggtggtcgtggccgcggccatgggggttacggtgccgctgga
gatgacgagaattacccgagcaattaccaggtggtacccatgcccggagcatcgcgaaat
tgtaccggatcaggatgctgcgcgcccaagtgtttcgccgagaagggatcgcggggacca
ccaggaataatcggaccgcaaggacctaagggacaacgcggttttccaggagcagaaggt
cttttaggacccaaaggtgagaagggagatcctggtccacaaggtccgcacggtgcgaaa
ggtgatagaggaaaaatgggtatgcctggttttcctggtataaacggtgtaccaggagta
caaggatctccgggttctcctggcgttcccggtcatgacggttgtaacggaacggatggt
gaacgtggtcgtgatggtgtacctggagaaccaggacctcgcggtcttcgaggtctacct
ggatctaaaggagaaaagggtcaaccagcgtatgctggtgcttttccggtgggtcaaaag
ggtgaacctggtatggacggtgtaagagggcctcccggtcctcctggttatcaaggagaa
cgcggtctgtctggttcgaagggtgaacgaggtccctacggtgcccctggcatactaggt
cccaaaggagaaaaaggaaacatgggtctcggatttgaaggattaaagggagacaaaggt
caaaagggtgatccaggacctccgggttcgactgcgcccatcatgccattccaacaagga
atctcgcaagtcacgggtccacctggagaaccaggttataaaggagataaaggtgaaatg
ggaccagaaggacaaaaaggagaaccgggatttataggtgatcatggtatacctggagga
ctaggacaaaaaggagaaaagggtcttccaggagctccaggcattcgtggtagagatggt
ttctctggacctcctggacctcctggacgaaaaggtgatcgaggtattgacggattggag
ggacttgctggacgatccggcaaaaaaggagaacccggtcgagatggaacgatgggtgtt
tcaggtttacgaggacctcctggaccaccaggaggtggtaaaggaagacctggaccacca
ggtccaaaaggaccacgtggttttccaggacctactggaccacggggagcagacggcttt
ccaggagatccaggaccgagaggacccataggtttacaaggaggtcccggatcgtctgga
attccaggtccagagggtttgccaggagaaaagggtggaaagggtgagcctggcttgacc
ggattccccggaggtccaggaccacgtggatttgatggaccacctggagcggtgggacca
cgaggaccgctaggagacaaaggatactctataatgggaccgaaaggagtggatggaacg
cctggcttagatggagagaagggtcaaaaaggcgaacggggttacgcgggtgtacgtggt
cgaccaggagattctctagacggtataccaggagcaccgggtgcacccggtgagccagga
gaagccggagcgccaggaagagacggtgtaccaggtctttctggagcgtctggagagaaa
ggagatatcggcggtcgttgtatagattgtataccgggattgcgaggcgctaaaggagat
cgtggtttcgatggtgcgcccggacttaccggtcctcgaggtccacctggagaacgcggt
ttccctggagaagctggagtggatggtttgccaggcacaatcggacctccaggactaccg
ggaaaagatggtatacccggtgctccaggacctcaaggagagcccggaaccccagcaacc
gtgacatggaatatgcttaaattagaaaagggtgataaaggagcgcgcggagagcctggt
cgacaaggtccgccaggaccagaaggacctctgggagaaaagggtagacctggattcgaa
ggtttcccagggcttaaaggaacaccaggagatcgtggtttccctggacaagatggtgtt
ccaggaagaccgggaacgcctggacgcaagggagagaaaggattaagtgtaaaaggtgaa
tccggagaatcaggtcgaccaggatctccaggacagaaaggagaacctggtttgtacgga
cttaagggtgaacctggtcaatgtccaccactcgaccttatgaaaggcttcaaaggtgat
cgaggtttaaccggtgacaaaggagagccaggaccacctggcagggatggattacctggt
gataaaggattgcaaggcttctcgggtccacccggtacatctggcccaatcggtgctcct
ggacctgtgggtccaagaggtttacctggtccgcgtggtgataagggtaatatgggtcct
atgggtttcccaggagaacttggtcgagaaggacctaggggtttcccgggtgctccggct
ccgaagggtgaaaaaggagaatctggaatatcagtcaaaggtagtcctggtctaacaggt
cctccgggtgaaaagggagagaaaggtcttcctggaccaccaggaaaagaaggtccacgc
ggttatcagggattagcaggctttgttggcgagaaaggagacatgggcccaccgggaata
aatggtttgccaggagcgcctggtgcgaaaggagacacaggtctgattggtccacctggt
cctccaggtgttgctggtattccaggagcggatgggattaaaggcgagccagggttacca
ggagaaccaggtagagcgggtctcccaggattcccgggagcaaaaggggatcgcggtgaa
ccaggtatcgatggaccaaaaggatatcccggcagacgaggattacctggtactccagga
cgagatggtattgatggagcgaaaggcgaatctggaaaaccaggcattggcgatgacgga
ttgcctggattaaagggtgagccgggtataccaggtcgggatggattaccaggattccaa
ggtcaaaaaggtgatactggtgtaagaggattccctggaataaaaggcgactatggtcca
ccgggtatacctggagaacccggtccgcccggtatagacggacttcctggagaagtaggt
gaaatcggatcacagggagtacctggtttccctggaattgatggcgagatgggctctcct
ggccggcctggactcgatggtattaaaggagaccgcggtttacaaggactcgtcggattg
cctggtattcaaggagcaataggagaaaagggagatcgtggtccgtcaggacctacaatc
cagattaagggtgaaaagggtgagccaggtattcctggattttctggagaaaaaggagag
aaaggaaatcaaggtataacaggtatcactggttatgatggtgaaaagggcgacagaggt
ctatctggactcgatggatctcctggacctcatggtactcccggacctaaaggtgaacaa
ggacctgctggtattcctggagttcctggagttacaataaaaggcgagaaaggtttgcct
ggtctattgggtaagcacggtagagacggatttccaggacgacctggtgagaaaggtgaa
ccaggattacctggtttgcctggaccaaaaggagacattggtccttatgggccagttgga
cctcaaggtgaaaaaggtgatcaagggccatcaggtctgactggatctccaggacgtgat
ggtagtccaggtctcgaaggtgcacctggattacctggtgaaagaggtcagaagggtgat
caaggaccgcctggattattcggtgctccaggacaaaaaggagaatccggttttccagga
ccaaatggattggacggacctcaaggagaaaaaggtgaaagaggttgggatggtgtaaat
ggtctacctggaccaattggtgaaaaaggtgatagaggatatcctggtacagttggatta
atgggttccgttggctacgaaggtcagaaaggtgaaaagggtgaagactgtctcgagccg
ccaatgggacctaaaggagatcgcggatatcctggctcgcccggaccgtctggtcctcag
ggaggaaaaggacttccaggtccacccggtttctccggcgcagacggcattaagggtgcg
caaggttttatcggttcaccgggacctgctggactaccgggattacctggacctgtcggt
gcacccggtttactgggccttcaaggtcccgttggtgcgccaggactcatcggcgagccc
ggtgcaccttgcgaaacgacacctgattatctcaccggtatccttctggtcaaacacagc
caaagtcaaagcgtgccgatttgcgaaccgggccacataagactctgggagggatacagc
ttgctttacactgacggcgatgagagagcgcactctcaagacttaggttatgccggctcg
tgtgtaagaaaattctcaacgatacccttcctgttctgcgacgtcaacaacgtctgccat
tacgctagtcgcaatgatcgttcttactggctatctaccaataggccaattcccatgatg
cccgtcgaggaggcggcgatagaagaatatatctccagatgtgtggtatgcgaagttccg
gctaatgtgatagcggtacacagtcaaacgataagcattccagaatgtccggcgggatgg
accggtctttggatcggttatagttttgtaatgcacaccggcgcaggttcccagggcggt
ggccagtccctgtcgagtcctggttcctgcctggaggacttccgcgccacaccgttcatc
gagtgcaacggcgccaaaggacactgccattactattctaatcagttcagcttctggatg
gtgaccatagaagacggccagcagttcaggagccccgaaaaacagaccttaaaggcgggc
aatcttagatcccgaataagtcgctgccaagtttgtataaagaatacataa
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integrated database retrieval system
