Mycetomoellerius zeteki: 108721662
Help
Entry
108721662 CDS
T11078
Name
(RefSeq) fibril-forming collagen alpha chain
KO
K19719
collagen type II alpha
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
108721662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mzt00536
]
108721662
Glycosaminoglycan binding proteins [BR:
mzt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108721662
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
SMC_N
Motif
Other DBs
NCBI-GeneID:
108721662
NCBI-ProteinID:
XP_018301816
LinkDB
All DBs
Position
Unknown
AA seq
1716 aa
AA seq
DB search
MTLQLNEKITKIENELNDLVNLKVDEKIDIIKQRMQKINTNLQNYRNKYDEITMQFESVK
AKRYKSFSDCLERVTAEIDHIYKRLVNNTSAQAIILPDNFEEPYAGNIIYNCIAPYKGFQ
PLQYLSDGEKSMASLALLFAIERYKQIPFFIMDEGDAALDKMNIKNIISFIRSQETSIQF
ITISLRKELYRNADALVGVTVQRDFTMRRRALELITGLLVVQLLLPLPDQVNAVKNRLRK
QRSKPQEHQAQQSSNNYEYDYNYENYDEYDEKNETTTVLPSRAIPSDITQLSERSEITTE
AFLRRETPTDLPAPTTTQFYNHGRSKETSSTSARDHSVLSTEILPGESNIYSSVAVPGIR
GSPGRPGDAGRPGDSGYPGQPGTPGIPGPPGPPGPVPDVSLYYQQLALSQANEDKGPTDA
AASLYGPETLPYIQAQVGPMGPQGSPGSPGPPGPQGFQGTRGETGELGSPGPPGMPGPRG
LPGLPGKDGISGEDGETGLPGSPGPVGQRGLPGIPGLPGLKGHRGFPGLDGAKGEQGISG
EKGSMGSPGSMGLVGPMGPAGPRGERGREGSPGPPGLRGLDGIAGSPGQPGVIGKPGSPG
FPGNPGIKGDQGLQGPTGNQGLQGPRGESGRPGQPGETGPQGPQGKDGIPGERGAIGAIG
PVGVIGFPGARGQSGTPGNPGIPGAKGAPGLPGDRGLKGDTGVKGDAGIPGPRGLPGPPG
NEGKRGKRGMRGPTGSVGPSGERGVPGERGLPGSDGPSGPQGQSGDRGPPGAVGSKGATG
DPGRPGPTGLQGARGLMGRPGASGKTGNPGERGIQGADGKPGEQGLPGLQGLPGPIGTPG
ERGYPGERGKDGEPGNAGPPGPRGDTGKEGPPGVQGLPGPPGSDGARGLLGPTGPRGFQG
LPGAAGNPGVPGKDGEAGVQGRPGPPGMVGDRGERGFPGERGLIGHPGPVGPRGETGIQG
SDGLIGLPGSKGDKGSFGSPGLLGLPGARGLPGEFGQKGERGTIGPIGPEGPSGHIGERG
PQGEVGPSGPPGEPAERGDPGSPGPIGEPGAPGNPGERGPHGLQGSQGFPGPQGLIGLPG
LKGDRGYPGLKGEQGNPGLLGSRGEIGAPGPIGLTGAKGIRGDPGIRGEAGLMGPPGIIG
HVGPSGPPGNIGPLGAPGLPGVKGDAGDTGHPGNPGPIGNPGLPGIDGIKGESGSPGSQG
PTGSQGPQGPPGERGLSGLPGSPGPIGNRGLRGAPGEIGQPGKIGAEGPPGPPGLIGSPG
VPGHTGEIGPEGPTGKPGPPGIGGRPGDKGPPGVPGAAGPSGPPGLPGQSGPTGSIGLTG
ERGLKGETGLQGVEGPQGPRGKPGPAGVEGIKGDHGEEGQKGAKGHRGFTGLQGLPGSPG
LIGEKGIPGLPGLPGKDGEPGIRGNPGREGNPGPIGPAGNPGPRGPLGEEGRQGSPGFPG
PPGPPGPPGEVGFGYDAASLAAFIGQGQTKGPDPLGDEPPRIFSKDITEKERRELLLKAY
ENLKSSFQKLMKPDGEKNSPAKTCRDLFVAYPDKLSGEYWIDPNEGDVRDAILVYCDAEK
RATCILPNPSRSPEITHITDQQETWLSEIDNGMKITYKADSNQIGFLQLLSKHANQNITY
HCKNSVAYFDYEKKSYKRGLKLLAWNDVELIPRGNQRLRYEMIMDECRIYRNHWGKTVVS
YETDKPVRLPILDVALRDIGKPEQSFSIEIGPTCYD
NT seq
5151 nt
NT seq
+upstream
nt +downstream
nt
atgacacttcaacttaatgagaagattacaaaaattgagaatgaacttaacgatttagta
aatcttaaggttgatgaaaagatcgatattataaagcagcgaatgcaaaaaataaatacg
aatcttcaaaactatcgtaataaatatgatgaaataacaatgcaatttgaatcagtgaag
gcaaagaggtacaaatcgttttcagattgtctggaacgcgttactgcggaaatagatcat
atatataaaagattggttaacaacacatcggctcaagcaattatcttaccagataatttc
gaggaaccatatgcaggcaatataatttacaactgcatagcaccgtataaaggctttcag
ccattgcaatacttatctgacggagaaaaatcaatggctagtctggcattattatttgca
attgaacgttataagcaaataccgtttttcattatggacgaaggtgacgcggcattagat
aaaatgaatattaagaatatcatttcttttattcgctcccaagaaacctctatacaattc
atcacgatatccttacgcaaagaattatatcgtaatgctgatgcacttgtaggagttact
gttcaaagggacttcacgatgagacggcgggctttagagctgatcacgggacttctcgtg
gtccagctgctgttgcctttgccggatcaagtgaacgccgtgaaaaacagattgaggaaa
caacgatccaaaccgcaagagcatcaggctcagcaatctagcaataattatgaatatgac
tataactacgagaactacgatgaatacgatgaaaagaatgaaactacaacagtattgcca
tcacgtgcaataccatcagatatcacgcaactttcggagagatccgaaataacaacagaa
gcattcttgagacgagaaacacctacagacttaccagctcctacgacaactcaattttat
aatcatggtagatcaaaggagactagttccacatctgctcgggatcattcagttttgtct
acggagattttaccgggtgaaagtaacatatatagttctgtggctgtaccaggaatacga
ggttcacctggtcgacctggagatgctggtcgtcctggcgattcaggatatcctggacaa
cccggtacacctgggatcccagggccacctggacctccaggacctgtacctgatgtatct
ctttattatcaacaattggctttgtctcaagcaaatgaagataaaggtccgactgatgca
gcggcatcattgtatggaccagagacattaccttatattcaggcacaagtaggcccgatg
ggtccgcaaggttctccaggttcacctggtcctcctggtcctcaaggttttcaaggtacg
cgaggtgaaaccggtgaactgggttctccaggccctcctggcatgccaggtcctaggggt
ttaccaggattgcctggaaaagacggtattagtggagaagatggcgagactggtctacca
ggatcgcctggtcctgtgggacaacgtggccttccaggaatacctgggcttccagggctg
aaaggtcaccgtggttttccaggtctagatggtgccaaaggtgagcaaggaatttctggt
gaaaaaggatctatgggctcgcctggatcgatgggactagtaggaccgatgggtccagct
ggacctcgcggcgaaagaggtagagaaggttcgccgggtcctcctggattgagaggcctc
gacggaattgctgggtcgcctgggcaacccggtgttataggtaaacctggctcaccaggt
tttccaggcaatcctggaattaagggtgatcaaggactgcaaggaccgacaggaaaccag
ggtttgcaaggtccgcgaggcgaaagtggccgtccaggacaacctggtgaaactggtcca
caaggtcctcaaggcaaagatggaattccgggtgagagaggagccattggagcaatagga
cccgttggtgtaatcgggtttccgggtgctcgaggtcaatctggaacaccgggtaatcct
ggtattcctggcgctaaaggagcacctggccttcctggtgatagaggtttgaaaggagac
actggagtgaaaggtgatgcaggaatacctggtccgcgtggacttccgggacctcctggg
aatgagggcaaaagaggcaaaagaggtatgcgtggaccaactggctctgtaggaccttct
ggagaacgcggcgtacctggagaacgtggtcttcctggatcggatggtcctagcgggcct
caagggcaatctggtgatcgtggtcctccgggagctgttggatcaaaaggcgctactgga
gatcctggacgacccggaccaacaggattacagggtgcacgtggtttaatgggtagaccc
ggagcctccgggaaaacaggtaatcctggggaacgtggaattcaaggtgcggatggcaag
cctggagaacagggactgcctggattgcagggtctaccaggaccaataggaacaccaggg
gaaagaggatatcctggagaacgtggaaaagatggtgagcctggcaatgcaggtccgcct
ggcccaagaggagatactggtaaagaaggacctccaggagtacagggtctaccaggtcca
ccaggaagcgacggcgcgcgaggtcttctggggcccactggtcctagaggttttcaaggt
cttccaggcgccgccggtaatccaggtgttccaggcaaggatggagaagcaggagtacaa
ggacgtcccggtccgccgggaatggtcggcgatagaggcgagcgaggatttccgggagaa
agaggacttattggacatccaggacctgtaggacctaggggagaaaccggaatacaaggc
tctgatggtctcatcggtttaccaggatccaaaggagacaaaggaagtttcggttcaccg
ggattattaggacttcctggagcgagaggattacctggagaatttggacagaaaggagaa
aggggtacaatcggaccaatcggccccgaaggtccctcaggacatattggagagcgtggt
ccacaaggagaagttggaccttctggccctcctggagaaccagctgaacgaggtgatcca
ggttctcctggtcccattggcgagcccggagctcctggtaatccaggagaaagaggacct
catggattacagggctcgcaaggtttcccaggcccacaagggttaatcggacttccgggt
ctgaaaggtgatcgtggatatccgggtttaaagggagaacaaggaaatccgggactactt
ggcagtcgcggcgagatcggagcacctggacctattggacttactggtgctaagggaatc
agaggtgatcctggtatacgaggtgaagccggtttaatgggcccacctggtattatagga
catgttggaccatcaggaccaccagggaatataggaccacttggtgctcccggattacct
ggtgtcaaaggtgatgccggcgatactggacatcctggaaatccaggtccaatcggtaac
cctggtctacctggaatcgatggaattaaaggcgaaagtggatctccaggctctcaagga
ccgacaggttctcaaggacctcaaggtccgcctggcgaaagaggtttatcaggtctacct
ggttcccctggtcctatagggaatagagggttacgcggagctcccggtgaaataggacaa
cctggaaaaataggagcagaaggtccgcccggacctcctggattaataggttctccaggt
gttccaggtcacacaggagaaataggaccggaaggaccaactggaaaaccaggaccaccg
ggtataggaggccgaccaggtgacaagggaccacctggagtacctggtgctgcaggacca
tcaggtcctcctggattacctggacaatctggtcccaccggatctatcggactcactgga
gaacgtggtctgaaaggtgaaacaggattgcaaggtgtggaaggtccacagggaccacga
ggaaaacccggcccagcaggtgttgaaggtataaagggggatcacggagaagagggacag
aaaggagctaaaggacatcggggatttactggtttacaaggattacccgggtctcctggt
ttaataggagaaaaaggtatacctggtctgccaggacttcccggtaaagacggagaacca
ggtattagaggtaatcctggacgagaaggcaatccaggtcccatcggacctgcgggaaat
cctggaccaagaggtccacttggggaagaaggtcgccaaggatcaccaggttttccagga
cctcctggaccaccaggtcctcctggagaagtgggtttcggttatgatgcggcgtcttta
gcagcatttataggacaaggtcaaactaaaggaccagatccacttggagatgaaccacca
agaatatttagtaaagatatcactgaaaaggaacgaagagaattacttttgaaagcgtac
gaaaatttaaaatcgtcgtttcaaaaattgatgaaaccggatggtgaaaaaaattcgcct
gctaaaacttgccgagatctatttgttgcttacccggacaaattatctggtgagtattgg
attgatccaaacgaaggagatgttcgggacgcgatcttagtctattgcgatgccgagaaa
cgtgcaacttgcattttaccaaatccatcgcgttcaccagagatcactcacatcactgat
caacaggaaacttggttgagcgagatagataacggcatgaagattacatacaaggcagat
agtaatcaaatcggtttcttgcaattgctctcaaaacatgcgaatcagaacatcacgtat
cattgtaaaaacagcgtggcttactttgattacgagaagaaatcgtacaaaaggggcttg
aagcttttagcttggaacgatgttgaattgataccacgaggtaatcagcgtcttagatat
gaaatgataatggatgaatgcaggatctatcgaaaccactggggtaaaaccgttgtctca
tacgaaacggataaacccgtaagacttcctatattagacgtggctctgcgagatatcgga
aaacccgaacagagtttttctattgagatcggtccaacttgttatgattaa
DBGET
integrated database retrieval system
