Mycetomoellerius zeteki: 108722416
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Entry
108722416 CDS
T11078
Symbol
Upf2
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03013
Nucleocytoplasmic transport
mzt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
108722416 (Upf2)
03015 mRNA surveillance pathway
108722416 (Upf2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108722416 (Upf2)
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
108722416 (Upf2)
mRNA cycle factors
P-body specific factors
108722416 (Upf2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
108722416
NCBI-ProteinID:
XP_018303021
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MSENANEAAPVEKETTVEEPDTISEKDRQFLTEYVRETEQRLATKEEIRAANLNPARPPD
ASFSKLDSSLKKNTTFVKKLKNFSMAQLDTVLKDMATLNLTKYVSEVATALVDAKIKMID
VAPAIRVCSFLHQTYAEFSTHFFENWQRILSLKVGDKIANPSKLRVDLRFYAELVNAGIF
THKQGLPLLGSILTVLINMDKEEHNNASIILSFCRHCGEDYAGLVPKRVRELSEKLNISI
PKSKMLSPDKQQNVKLLLREYYNSLCKHMLKEHKELQAFEKQNRKILQTRGELSSERKEK
LEALQVSYERLLTNVQSFSDTLDEPMPELPVDNEIKAEVEETLKMINEGEENAMLEDMWG
DEETRRFYEMFPDLTVFLPGSYLKDTPKDVPKTDTAITEDALDEEIVFDELEESEKVEEP
PEIEVEEPQISNTSNKILLDAFLTHLPNCVNREMIDNAAVNFLINLNTKHNKKKLVKALF
GVSRIRQDLLPFYSRLAAILYPVMPEIGNDLCQMLKQDFKYHVRKKDQINIESKIKVVRY
IGELVKFKLYSKIEALYCLKVLLHDFTHHHIEMACNLLEICGRYLFCSPDSHQRTKVYLE
QMMRKKAVTALDSRYVTIIENAYYFVNPPESTGGVTKKDRPPVHEFIRKLLYQDLSKTNT
DKVLKWMRKLDWEDESVSSYAIKCLTAAYNVKYPNIRCVGSLLAGLVAHYETIGPQVVDG
VLEDIRLCMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSVDHSLQ
SVLDPPDHLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLVFFQNYFWFKYTDPIWTSENP
FPVGIDYMYRDTLTMLRPKMQLFQNYKEAQCAVEELRNTLYPTLGNPPVDDAIAEGENDM
GVIMEGDEEAALAGNGSGDAKGMAELHFEESEDCSEAQSEEEWTADAERDDTMGTQENTQ
GDRSQSLSADGGTEGVIVDVTEELNAALPSGPRRVSCPEDDDFLSALDKMVSDNIQDRMR
DSVKPQQVDISVPLHVKSTKKTYEQLQERPTDNSTVDFVLMLRKGNKQQYKNLAVPVSSE
LAMNLRNREQEQKEEKERVKRLTLNITERQEEEDYQETMNQSTRPVTVNLNRERRQKYNH
PKGAPDADLIFGPKKIR
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagaacgcgaacgaagcggcgccggtcgagaaagagactaccgtggaagaaccg
gataccatctcggaaaaggaccggcaattcttgactgagtatgtgcgagaaacagaacag
agactcgcgacgaaggaagagattcgcgcggccaatcttaatcccgcaaggcccccggat
gcatcattcagtaaactcgactcgagcctcaagaaaaacactacatttgtcaagaaactt
aagaactttagcatggcccaactcgacacagttttgaaagacatggcgactttaaacttg
accaaatacgtgagcgaagttgccaccgctctggtggatgctaaaataaagatgattgac
gtagcacctgctattagggtatgtagttttctccatcagacgtacgccgaattttccact
catttttttgaaaattggcaaaggatactgtcgctgaaggtaggcgacaagatcgcaaat
cctagcaagctgagagtagatttacgattctatgcagaattggtaaatgctggaatattt
acgcacaagcagggtttgccgctacttggctcgatactaaccgtattgatcaatatggac
aaagaggagcataataatgctagtataatattgagtttttgtcgacattgtggcgaagat
tacgctggtcttgtacctaaaagagtccgagaactgtctgagaagttaaacatttcaatt
ccaaagagtaaaatgttatcaccggataagcagcagaacgtcaagctgttgttgcgtgag
tattacaattccttgtgcaagcatatgctgaaggagcacaaggagttgcaggcattcgag
aaacaaaatcgcaagatactgcagactaggggagaactgagttcggaacgaaaggaaaag
cttgaagctctgcaagtcagttatgagcgtttattaaccaatgtacagagcttttccgat
acgctagatgaaccgatgcccgagcttccagtggacaatgaaataaaggccgaagtggag
gaaacactgaagatgatcaatgagggagaagagaacgctatgttggaggatatgtggggc
gacgaagagacaagacgtttctatgagatgttcccggatctgactgtctttttaccaggc
tcttatttgaaggacaccccgaaagatgtcccgaagacggacacagcaataacggaagat
gctctcgatgaggaaattgtcttcgacgagttggaagagtctgagaaggtcgaagagcca
cctgagatagaagtggaggagcctcagatttctaacacgagtaacaagatactgttggac
gcttttctgacgcatctgccgaactgtgtaaatcgcgaaatgattgacaacgccgcagtc
aacttcctgattaatctcaacacgaagcacaacaagaagaagctggtaaaggctcttttc
ggcgtttctagaatccgtcaggatctactacccttctattctcgcttagcagccattctt
tatccagtaatgccagagattggcaacgacttgtgtcagatgttgaaacaagattttaaa
taccatgttcgcaagaaggatcagatcaatattgagtcgaagatcaaagtggtccgctat
atcggtgaactcgtcaagttcaaactttactccaaaatagaggcattgtactgcctgaag
gttttattacatgactttacgcatcatcacattgaaatggcttgcaacttgttggagatt
tgcggccgatacctcttctgttcgccggattctcatcaaaggaccaaggtctatctggag
caaatgatgcgcaaaaaagcagttactgcacttgattcgcgctacgtcacgatcatcgag
aatgcgtattacttcgtgaatccacccgaatcgaccggcggcgttacaaagaaggacagg
ccgcctgtacatgaatttattagaaaattactgtatcaggatctctccaagacgaatact
gataaggtgctcaagtggatgcgcaaacttgactgggaggacgagagcgtgtcatcctat
gctataaaatgtctcactgccgcctacaatgttaaatatcccaatattcgatgcgtgggt
agcctgttggccggcttggtggctcattatgagaccatcgggccacaggtggtcgacggt
gtactcgaagatatacgactatgtatggaaatcaacctgcccaaattcaatcaacgacgc
attgctatggtcaagtacttgggcgagctatacaactatcgaatggtagagagcggcgat
attttccgtaccttgtacttgcttattactttcggcgtcagcgtggaccattcgttgcaa
agtgtactcgatccgcctgatcatctctttcgtattcgtctagtgtgcacattattggag
acttgtggccagtacttcagcggcggatcaagcaagaaaaaactcgattattttctcgta
ttcttccaaaactacttctggtttaagtatacagacccgatctggacgtccgagaatccg
ttccccgttgggatagattacatgtatcgtgacacactaacgatgctacgacccaaaatg
caattattccagaattacaaagaagcgcaatgcgccgtggaagaattgcgcaacaccctc
tatccaaccttgggtaatcctccggttgatgacgctatcgcggaaggtgaaaacgacatg
ggcgttatcatggaaggcgacgaagaagcagcattggccggaaatggtagcggggatgcc
aaaggtatggctgaactgcatttcgaagagtccgaagattgttcggaagcacagtcagaa
gaggaatggacagccgatgcagaacgagacgacactatgggcacccaagaaaacactcag
ggtgatcgatctcagagtctgtcggcagacggtggcactgaaggcgtgattgtagacgtg
acagaggaactgaatgcagctttaccgtccggaccacgacgggtgagctgtccggaggat
gatgatttcctgtcggcgctggataaaatggtctcagataacatacaggaccgcatgcga
gattcggtaaagccgcaacaggtggatatctccgtgccgttacacgtgaagagtacaaag
aagacatacgaacaactgcaggagagaccaaccgacaatagcacagtagactttgtgttg
atgctgaggaagggtaacaaacaacaatacaagaatcttgcggttccggtgtcatctgag
ttggccatgaatctcagaaatcgcgaacaagaacaaaaagaagagaaagagcgcgtgaag
agactaactttaaacattactgagaggcaggaggaggaagattatcaagaaactatgaat
cagagcacgagaccggtcaccgtaaacttgaatagggaacgacgacaaaaatataatcac
cctaaaggagcacctgatgccgatctcatctttggaccgaagaaaattcgataa
DBGET
integrated database retrieval system
