Mycetomoellerius zeteki: 108722526
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Entry
108722526 CDS
T11078
Name
(RefSeq) pre-mRNA-splicing factor SYF1 isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108722526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108722526
03041 Spliceosome [BR:
mzt03041
]
108722526
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
108722526
Spliceosome [BR:
mzt03041
]
Complex B
Other components
Prp19-related factors
108722526
Complex C
108722526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_15
TPR_12
RPN7
PPR
TPR_10
NRDE-2
Mad3_BUB1_I
ARM_TT21_C
DHR-2_Lobe_A
Spore_III_AF
Motif
Other DBs
NCBI-GeneID:
108722526
NCBI-ProteinID:
XP_018303188
LinkDB
All DBs
Position
Unknown
AA seq
843 aa
AA seq
DB search
MLERKDNDGNVYGFNEEDLPYEEEILRNPFSVKHWQRYIDHLKSTNSKNLNVVYERALKE
LPGSYKLWYNYLRQRVSQLKGRCIIDPLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEE
CYITRTRQVFDRSLRALPITQHHRIWPLYIHFLKKHNVYETAVRVFRRYLKLAPEDTEEY
IEYLISIERLDEAAVKLVQIVNQDDFVSKHGKSNHQLWNELCDLISKNPSKIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLKKLIEEAASSPTEEDDIKLELRLARLEHLMERRLLLLNSVLLRQNPHNVAEWHKRV
KLYEGQPHEIINTYTEAVQTVQPQLAVGKLYTLWVAFGKFYEENGQIEDARVVFEKATHV
PYTKVDDLASVWCEWAEMEIRHGNCKEALKLMHRATTMPARKVAYHDETETVQMRLYKSL
KVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENNYFEEAFRAYEKG
IALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEYCPPKYAKALYLLYAKLEE
EHGLARHAMSVYERATNAVLPEERFDMFNIYIKKAADIYGVPKTRQIYEKAIEVLNDDNT
REICLRFAEMETKLGEVDRARAIYAHCSQICDPRVTSNFWQIWKEFEVRHGNEDTMREML
RIKRSVQAMYNTQVNMMSAQMLNNASNQISDVTSLDAMRLLDSKITASADNAADVKGVIK
FVRGVTEKDGKPESHVNNPDEIDIDIDDENDNDVEIEEDIPIEKQTIPSQVFGSLKAIQT
EED
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atgttggaacgtaaagataacgatggaaatgtatatggctttaatgaggaggatttacca
tacgaagaagaaattttacgaaatccattttcagtgaaacattggcaacggtatattgat
catcttaaaagtacaaacagtaagaatttaaatgtggtatatgaacgagcattaaaagaa
cttccgggcagttacaagctatggtataattatcttcgacaacgtgtgagtcaactaaaa
ggtcgatgtataatagatccattatacgaagatgttaataatgcatttgaacgagcttta
gtatttatgcataaaatgccacgtatatggatggattattgtaccctaatgactgaagaa
tgttatataacacgaacgcgtcaagtgtttgatcgatctcttagagcgcttcctattacg
cagcatcatcgtatatggccattatatattcatttcttaaagaaacataatgtatatgag
actgctgttagagtctttagaagatacttaaagctagcaccagaagatacagaagaatat
attgaatatttaatatctattgaaagactcgatgaggctgctgtgaaacttgtacagatc
gtcaaccaagacgattttgtatcaaagcacggaaagtctaatcatcagctatggaatgaa
ttatgcgatttaatatcaaaaaatccttccaagataaaatctttgaatgtagatgctatt
attagaggtgggttaagacgttatacagatcaattgggacctttatggaattcattagca
gattattacgtacgaagtggtctctttgaaagggcaagggatatttatgaagaagctata
caaacagttaccactgtcagagattttacacaagttttcgatgcttatgcacaatttgaa
gaacttagtcttaagaaactcatagaagaagcagcaagcagtcctactgaagaagatgac
ataaagttagaattgagattggcgcgattagaacatctcatggaaaggagactattgtta
ctcaattctgtgttgttacgacaaaatccacacaatgtagcagaatggcataaaagagta
aaactttacgaagggcaaccacatgagataattaatacatatacagaagcagttcagaca
gtgcaaccacagttagcagttggtaaactgtacacattgtgggttgcgtttggcaaattt
tatgaggaaaatggacaaatagaagatgctagagtagtatttgaaaaagcaactcatgta
ccatatactaaagtagacgatcttgcttcagtatggtgtgaatgggcggaaatggaaatt
agacatgggaactgcaaagaagctttaaaactcatgcatcgcgccactacaatgccagct
agaaaagtagcatatcatgatgaaacggaaacagtacaaatgagattatacaaatcttta
aaagtatggtctatgtatgcagatttggaagaaagtttcggtacatttaagacttgtaaa
gcagtatatgacaaaataatcgatttgaaaatcgcaactcctcaaattatcatcaattat
ggattgtttttggaagaaaataattacttcgaggaagcatttagggcatatgaaaaaggt
attgcactatttaagtggcctaatgtttatgacatttggaatacgtacctcacaaaattt
ttaaaacgttacggtggtacaaaattggaacgtacaagagatctgtttgagcaatgttta
gaatattgtccaccaaaatatgccaaagccttgtatttgttgtacgcaaagttagaagaa
gaacatggtttagcaagacatgccatgtctgtatatgaacgtgcaacgaatgctgtcctc
ccggaagaaagattcgacatgtttaatatatatataaagaaagctgcggatatatatggt
gtaccaaaaactcggcaaatatacgaaaaagctatagaagtcttgaatgatgacaacaca
agagaaatatgtttacgatttgcagaaatggaaaccaaattaggagaagtagacagagcg
agagcgatatatgcacattgtagccaaatatgtgatccaagggtcacgtccaatttttgg
caaatttggaaagaatttgaagtcagacatggaaatgaggatacaatgcgtgaaatgctt
cgaatcaaacgtagcgtgcaagctatgtataatactcaagtaaacatgatgtctgcacaa
atgttgaataacgcatccaatcaaatatcagatgttacgtcgttggatgctatgcgttta
ttagatagtaaaattacagcaagtgcagacaatgctgctgatgtcaaaggagttatcaaa
tttgtacgtggtgtaacagaaaaagatggaaaaccagaatctcacgtgaataatccagat
gagattgatattgacatagatgacgaaaatgataatgatgtagaaatagaagaagatata
ccaattgagaaacagactataccatcacaagtatttggtagtttaaaagcaatccaaact
gaagaagattga
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