Mycetomoellerius zeteki: 108723021
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Entry
108723021 CDS
T11078
Symbol
spel1
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
108723021 (spel1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mzt03400
]
108723021 (spel1)
DNA repair and recombination proteins [BR:
mzt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
108723021 (spel1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
DUF6870
AAA_27
Motif
Other DBs
NCBI-GeneID:
108723021
NCBI-ProteinID:
XP_018303967
LinkDB
All DBs
Position
Unknown
AA seq
922 aa
AA seq
DB search
MAVQPNQQFNMDPPTQQSFVRFFKNLPEKLDTTVRFFNRSDYYTVHGSDALFAAQEIFKT
TSVCKMIGAEPHKTEGVILNKSHFETFVRDLLLVKQYRVEVYINQGSSKNQNWILEYKGS
PGNLSHFEDILFGNNDIAVGVSVIAVKLGTEGKSRVVGLSCVDVISTLISVIEFQDNESF
SNLESLIVTLAPKECLLIQGEGSFEFQTLKQLMERSNVMVTLRKKNEFANDSIIDDLNKL
IKFKKGQKQNAQSLSEVNLNLAMSATSALIKYLDLTSDEGHMNQFKLNPIEQSRYIRLDS
AAMKALNIEPHTDTIPALHGNSVASILTLLDKCRTAQGHRLIAQWTRQPLKDLSLIKERH
DIVELLVKNNELRSTLSDDYLKRIPDLQQLAKKLARKKSTLQDCYKIYLCVSYLPKLLEQ
LLLEKNVTALNTMIIDPLKELIEDMDKFQQLIEQTIDLDAAEKGDFMVNPGFADDLKTLK
DAMDEVEETIEKQLSKAANDLCMEAGKMIKLECNQQLGYYFRITLKEEKTLRNKKHYTIL
DSNKAGVRFRNNKLNELNDDFVDARNKYLERQKDVIVEIVEIAAGYSETVRSIGGVLACL
DVLTAFSSAAVNANKVYVRPKMVPSEEGELNLIQVRHPCLEMQQGVDYIANDVIFKRDQC
HFCIITGPNMGGKSTYIRSVGVTALMAHIGSFVPCDEATISLLDCILARVGADDSQLKGL
STFMMEMIETAAILKTATCNSLVIIDELGRGTSTYEGCGIAWSIAEHLARDIKSYCLFAT
HFHEITKLAEEIPAVKNQHVTALVEGDKLTLLYKVMPGICDQSFGLHVAKMANFPSDVIE
FAKRKQAELEDYQSIAFEGSDNPQKKQKIIQESEVLISQFLTKCKALDPSLSDADLESQV
LSLKEDILSHKNPYIEALLATY
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgcaacctaaccaacagtttaacatggatcctcctacgcagcagagctttgtc
agattttttaaaaatcttccagaaaaacttgataccacagtacggttcttcaatagatca
gactattatacggtacatggaagcgatgctctttttgccgcacaggaaatatttaaaaca
acgtccgtttgtaaaatgattggagctgagccgcataaaacggaaggagttattcttaat
aaaagtcatttcgagacgtttgtgcgcgacttactattagtaaagcaatacagagttgaa
gtttatattaatcaaggctcgtctaaaaatcagaactggatcttggagtacaaaggttca
cccggcaatctatctcatttcgaagatatcttgttcggaaataatgacatagctgtgggt
gtatccgtaatagctgtgaaactgggtacagaaggaaagtccagagttgtcggcttaagt
tgtgtagacgtcatttcaactttaatttcagtgattgaatttcaagataatgaatcattt
tcaaatctagaatcgctcattgtaactctcgctcccaaagaatgtttattaattcagggt
gagggcagttttgagtttcaaactcttaagcaactaatggaaagaagtaatgtgatggtt
actttgcgaaagaaaaatgagttcgctaatgattcaatcatagatgatttaaacaaattg
atcaaatttaaaaaaggacaaaaacagaatgcgcaatcgttgtctgaagtcaacttaaat
ttagctatgtctgcgacatctgctctcattaaatatttagatttaacatcagacgaagga
cacatgaatcaatttaagttgaatccaatcgagcaatcacgatatatcagattggattct
gcggcaatgaaagctcttaacatcgaaccacatactgatacaattcccgctttacatgga
aattcagttgccagtattttaacattgttagataaatgtaggaccgcacaggggcaccga
ttgatcgcacaatggacccgacagcctcttaaagacttatctttaataaaggaacggcat
gacatcgttgaattattagtgaaaaataacgaattaaggtccactcttagtgatgattat
ttaaaacgtataccagatttgcaacagctcgcaaagaaactagcaagaaagaaatcgaca
ttgcaagattgttacaagatctatctgtgcgtatcgtacttgccaaaattattggaacag
cttttattagaaaaaaatgtgacagcattaaacacaatgataatagatccactaaaggaa
cttatagaggatatggataaatttcaacaattgatagagcagacgatcgatttagatgct
gctgaaaagggtgattttatggtcaatccaggatttgcagatgatttaaaaacattaaaa
gacgcaatggatgaagtggaagaaaccattgaaaaacaacttagtaaggcagcaaatgat
ctttgcatggaggcaggaaaaatgataaagttagaatgtaatcaacagcttggctattat
tttcgtatcacgttaaaggaagagaaaacacttagaaacaaaaagcattacactattctg
gattctaataaagctggtgtaagattccgaaacaataagttaaacgaattgaatgatgat
tttgtagatgccagaaataaatacttggagaggcagaaagatgttattgtagaaattgta
gaaattgcagctggctatagcgaaacagtgcgttctatcggtggcgtactggcatgtctc
gacgttcttactgcattttcttctgcagcagtaaacgctaacaaagtatatgtgcgtccc
aagatggtcccgagcgaagaaggtgaattaaatctcattcaagtcagacatccgtgttta
gaaatgcaacaaggagttgattacattgctaatgacgttatttttaagagagatcaatgt
catttttgcattattactggcccaaatatgggaggtaaaagtacttatattagatcagtt
ggtgtgactgcattaatggctcatattggtagttttgttccttgtgatgaagcaactata
tcattactggattgtatattggctcgagtaggagctgacgattctcaactaaaaggattg
tcgacttttatgatggaaatgatagaaacagctgccattttaaaaacagcaacatgtaat
tctcttgtgattatcgatgagttgggcagaggtacatctacttacgagggttgtggtata
gcatggtcaatagcagagcatttggcaagggatattaaatcatattgtctatttgcaacg
cacttccatgaaatcaccaagttagccgaagaaatacccgctgtaaaaaatcaacacgtt
accgctcttgtcgaaggcgataaattgacgttactttataaagtaatgccagggatttgt
gatcaaagttttggtcttcatgtcgctaaaatggctaatttcccatcagatgtaatagag
tttgccaaaagaaaacaagccgaacttgaagattatcaaagcattgcttttgaaggatct
gataatccccagaagaagcagaagattattcaggagagtgaagttcttatttcgcaattt
cttacgaagtgtaaagctttggatccgtctttatccgatgccgatctagaaagtcaagta
ttatcactgaaagaagacattctatcccataagaatccttatattgaagctttacttgcc
acttattaa
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