Mycetomoellerius zeteki: 108723933
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Entry
108723933 CDS
T11078
Symbol
tst
Name
(RefSeq) helicase SKI2W
KO
K12599
antiviral helicase SKI2 [EC:
5.6.2.6
]
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108723933 (tst)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108723933 (tst)
Enzymes [BR:
mzt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108723933 (tst)
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
108723933 (tst)
mRNA degradation factors
3'-5' decay
Ski complex
108723933 (tst)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
Ski2_N
DEAD
Helicase_C
MTR4_beta-barrel
DEXQc_Suv3
ResIII
ATPase_2
DUF3067
DUF3516
Motif
Other DBs
NCBI-GeneID:
108723933
NCBI-ProteinID:
XP_018305508
LinkDB
All DBs
Position
Unknown
AA seq
1206 aa
AA seq
DB search
MAESTQLFAGPPPIWPDIRSELREYIECPERLPIHQLDNTQCYWPRKADVLSLLEFDLAP
VNTTLKFDRDPMTGKIGEIQEIDLQGAGETARNSMSMTRAPGLLTDGVRGNPSNIPFWPG
GFEEPKVPKSEDMNDIDFEKDLRTLAKGFSSGLEFKSDNCTPIHCMRYEVEAATLEETEK
LIIKNDNINLMAVIHEEGNLLGSWSSVEEPKKESVQAVDNNIPFINNSILPKETDIPVLK
ISETQTELTKAEWAEQLDVSAPVTDFNKRVPDPAITFSYELDTFQKQAILKLEENSNVFV
AAGKTTVAEYAIALSQKHMTRVIYTSPIKALSNQKYRDFKRKFESVGLLTGDLQINQTAS
CLIMTTEILQSMLYCASDVLRDLEFVIFDEVHYINNEDRGHVWEEIVILLPQSINIVMLS
ATVPNPIIFADWVGRIKKRKMYVISTLKRPIPLLHYLYTGTDGKTKDDKFLVLDSNSQFL
LDGWYKATNASDRKKDKTSKDCRRKIQMTPKQEEVLWRAFVSHLQNNDMLPVVVFTLSRK
RCDMNAATFRNLDLTTAREKHQVHVFFQHNIKHLKGSDRELPQVLMMQELLEKGVGIHHS
GILPILREIVEMLFQSGVVKLLFATETFAMGVNMPARTVVFDSIRKYDGNNFRTLFPTEY
IQMAGRAGRRGHDTTGTVIVMCRHDVPHFNDLKPMMCGEPQTLESKFKVTYSMLLNLRRV
NESVTVEAMMRKSFKESPLASQEASYNNELRKIERELSNLPPLTEIQKKLSTFYHQAVDY
LEDVKFLNPYLLTSKKAAKSLIEGRVLLISYADHYNKLALLLQVLYHKSSTQYKVLILKD
ANVSTSETTDFKSPQIFEKWSEIISLTKKEIFVPSINPSHEVLTVFPWHILKITNCQIKI
DCSLVLNDWEKRQISRFKNDPPGQTCQTAVQELTSLSFNASTNARILQPYIEPSSKNDFQ
LRIQHRNKLKASLNDMKCMEIPNFEEQFKPVFERNHLEDKKRQLQLKLSDEGMALYPDYL
NMVALLKHFRYIDNDERVALKGRVALQMGSNELLITELILKNVLTVLQPAEIAALLSALI
FQQRTDVEPQLTPTLANACKIMNEVHAELEHLEQYYQLSTLLPLNFGLVEVVYEWAQAKS
FAEIMKMTDVQEGIIVRCIQQLGETLRDVKNAAVTIGDPILKEKMEEASTAIKRDIVFAA
SLYTQD
NT seq
3621 nt
NT seq
+upstream
nt +downstream
nt
atggctgaatcgacgcagttatttgctgggcctccacccatttggcccgatattagatca
gaactgcgggaatatattgaatgtcctgaacgattacctatacatcaattggataatacc
caatgttattggccacgtaaagcagatgtcctttccttgctagaatttgatttagctccc
gttaacaccacgcttaaatttgaccgtgatccaatgacaggcaagattggcgagatacaa
gaaattgacttacaaggtgcaggggaaacggcaagaaattctatgtctatgactcgtgca
cctgggttacttacagatggagttcgaggtaatcctagcaatattccattttggcctggt
ggttttgaagaacctaaagtgcctaaaagtgaagacatgaatgatatcgactttgagaag
gatttaaggacattagccaaaggatttagctcaggtttagaatttaaaagtgataattgt
acaccaatccattgcatgagatacgaagtagaagctgcaacattagaagaaactgaaaaa
ttaataatcaaaaatgataacataaatttaatggctgttatacacgaggaaggaaatttg
cttggttcatggtcttcagttgaagagccgaaaaaagaaagtgttcaagctgtggataac
aacattccctttataaacaattccattttacccaaagaaacagatatacctgtcttgaaa
atatccgagacacaaacagaacttacgaaagcagaatgggcagaacagctggatgtatct
gcaccagtaacagactttaacaagagagtacctgatccagcaattacattcagttatgaa
ctagacacttttcaaaagcaagctattcttaaattggaagaaaacagcaatgtcttcgtt
gctgcaggaaagactactgttgctgaatatgccattgcattgagccaaaagcatatgaca
agagtaatttatacatctcccataaaagctctgtcaaatcagaaatatcgtgattttaag
agaaaatttgaaagtgttgggttattaacaggtgatttgcaaataaatcaaactgcttca
tgtctaatcatgacaacagagatcctacaatcaatgttgtattgtgcatccgatgtttta
cgagatttagagttcgtcatatttgacgaagtgcattatataaataatgaagataggggt
catgtatgggaagaaatagttattcttttaccacagagtattaatatagtaatgttatct
gcgactgtaccaaatccaataatattcgcggattgggtcggtcgcatcaaaaagcgaaaa
atgtacgtgattagcactttgaaaagaccaatacctctgttacattatttgtatactggc
actgatggcaaaactaaggatgataagttcttagttcttgatagcaacagccaattttta
ttggatggatggtacaaagcgacaaatgcatccgatagaaagaaagacaaaacttcgaag
gactgtaggagaaaaattcagatgacgccgaaacaagaagaagtattatggagagcattt
gtaagccaccttcagaacaatgacatgttacccgttgtcgtatttactctgtcgaggaaa
cgctgcgatatgaatgctgccacgttcagaaatctcgatttaacaaccgcgagagaaaag
catcaagtacatgtatttttccaacataacataaaacatctaaagggtagcgacagagaa
ttaccacaagtacttatgatgcaagagctcctggaaaaaggtgtaggtatacaccacagt
gggatattaccaattttgagagagatcgtagaaatgttatttcaaagtggagttgtcaag
ttactgtttgcgacagaaacttttgccatgggagttaacatgccggcgcgcacggtagtg
tttgattctatacgaaagtacgatggaaacaactttcgtactttgtttccaactgaatat
atacagatggctggccgtgccggacgacgaggtcacgacactacaggtactgttatagtg
atgtgcagacacgacgtgccgcactttaacgacttgaaacctatgatgtgcggtgaaccg
cagacattggagtcgaaatttaaagtcacatactccatgcttcttaatttgagaagagta
aatgaatctgttaccgttgaagcgatgatgcgcaaatctttcaaggaatcgccgttggct
tcgcaagaagcgtcatataacaacgagttacggaaaatcgaacgcgaattatcgaatttg
ccgcctttgaccgaaatccaaaaaaaactctctacgttctatcaccaagcggttgattat
ctagaagatgttaaattcctaaatccttatttgcttacctcgaagaaggcagcgaaaagt
ttaatcgagggcagagttttgttaatatcgtatgcggatcattacaataaactagccctg
ttattacaagttttatatcacaaaagctctactcagtacaaagttttgatacttaaggac
gcgaatgtatccacttccgaaactactgattttaaaagtcctcagatatttgagaaatgg
agcgagattattagcctaacgaaaaaagaaatatttgtaccaagcattaatccatcgcac
gaagttttgactgtatttccatggcatatattgaagataactaattgtcagataaaaatt
gactgctctttggtattgaatgattgggaaaagaggcaaatctcacgattcaaaaacgac
ccaccaggacaaacatgtcagacagcggttcaagaattgacttctctatcatttaatgct
tctaccaatgctcgcattctacaaccatatatcgagccctcatcgaaaaatgattttcaa
ttaagaatacaacatagaaacaaattaaaagctagtctgaacgatatgaaatgtatggaa
ataccaaactttgaagaacaatttaaacctgtatttgaacgaaatcatcttgaagataaa
aagcggcagcttcaacttaaactcagcgatgaaggaatggcgttatatccggattatctg
aatatggtagcacttctcaaacactttagatacatagataatgatgaaagagtcgccctc
aaagggagagtcgcgctgcaaatgggtagtaacgaactgctgataacagaattgattcta
aaaaatgtgttaaccgttctacaaccagcagaaatagcagcgttactatcagcactgatc
tttcagcaacgcacggatgtcgagcctcaactcacaccaactcttgctaatgcttgcaaa
ataatgaacgaggtgcacgcggaattggaacatctagagcaatactatcaactgtcaaca
ttgctaccactgaatttcggcttagtagaagttgtctacgaatgggcacaggccaaatca
ttcgccgagatcatgaagatgactgatgtccaagaaggaattatagtccgttgcatacaa
caacttggcgaaacattacgagatgttaaaaatgcggctgtgaccataggtgacccgatt
ttaaaagagaagatggaggaagcatcgaccgcgatcaaacgtgacatagtgtttgctgcg
tccttatatacccaagactga
DBGET
integrated database retrieval system
