Mycetomoellerius zeteki: 108724459
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Entry
108724459 CDS
T11078
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(XI) chain
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
108724459
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mzt00536
]
108724459
Glycosaminoglycan binding proteins [BR:
mzt00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
108724459
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
108724459
NCBI-ProteinID:
XP_018306340
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MRLLDHVRGQWRTLRSTWIMLIVRSLFLLILCGLQRNTVDAALQDASKNVTDIIEATGMQ
EQLFGVRRTESRCRDDTIAYDIMEAAILMAPTNVLFPAGIPQDFSILAVAKPRASESTSK
DYSTSVLFTIYGDSGEEQLILSLERDIKFFYNPNPDDRNEPISFGVDISDGQWHRLGVSI
KGDAVTIILDCNRHITKKLRRNFEKTIAGILMIGQQLKGDLYLGSLEMLKIAVNPDAAYE
ICTTFAPDCEHESRYGLNYNSSFNEDDYEEENESDLDKDDNRDFLPHGTMTNTINVLTSG
TENSTFYEMEMTTIANVYNTESNHQQNYGESINNPYNHEEYIKRYNTRGSPGLRGFPGPP
GGPGSPGEKGEPGRDGLPGLPGVSGPPGNVFVISSLNQQGNEKGPDSQAEMLRQMISQHM
FAMRGVEGPMGLTGVPGPDGSPGPQGQKGEPGEIGEPGPRGDQGSSGNLGREGRRGRPGR
DGERGLSGLPGMKGEQGQIGLPGLPGDKGERGPSGKSGEPGLPGHEGMQGEDGPPGLPGL
PGELGPRGFIGPRGFSGLPGNPGIPGNEGPPGIKGNAGPLGPPGAPGQLGLTGSIGPPGP
QGPPGSIGLVGPQGKPGIPGLSGADGSPGLPGNPGIPATKGEQGPSGLQGPVGFPGVRGV
KGDEGQRGLAGERGEKGDRGLEGEKGDAGAKGEPGAXIPGLEGLEGPKGFEGLRGETGPA
GSLGEKGKVGLPGYAGYPGNPGEKGDKGQPGIQGPNSDKGERGNSGLQGERGTTGPRGFR
GTRGRRGAEGLPGPKGDTGQPGPAGPSGEIGPPGVEGPRGFAGPSGPPGLDGKDGIPGPS
GERGPTGESGSLGPPGIPGVIGLPGPLGEPGQPGEPGASGSSGAPGEIGLPGEQGKEGLP
GPPGLIGLKGSPGPGGLPGFPGERGLSGLPGLPGLKGEMGPIGAQGPPGDKGIQGDPGKD
GSPGPVGKQGYKGDKGSTGFKGEKGNPGSAGTIGRDGLPGQRGLPGPPGPIGSPGEDGDK
GNVGSPGEKGFKGSQGDVGLPGPQGVQGPRGESGLVGPPGEKGPLGEMGQRGPKGEVGPT
GATGSAGSVGPSGLPGQPGVKGEVGDPGTIGPIGLPGIPGERGPRGSKGFKGPEGPMGPE
GHQGEKGDEGMSGPPGKPGIEGKQGERGLPGIKGEEGKLGLLGLPGLRGLIGPEGPKGDA
GLSGLPGPPGEPGLMGAKGEPGKDGEDGRVGDPGLLGEIGLPGKEGLPGSPGKSGPEGPA
GQQGNTGLPGEKGDIGLPGESGLEGPVGPQGSSGLPGIPGERGLPGAVGENGPVGMPGAA
GAPGIIGLIGSKGQKGDKGRRGIKGYRGEPGLVGIKGDHGKRGEKGDRGLPGTQGFKGNP
GHPGQVGPKGEQGFVGLFGPPGPSGPKGNGGNDGMRGDIGPAGPPGPPGPPGLSIGQFDF
DRISPMIYHDQSTRRKRDASEDIDEEEIFDRKLSDINKAFSNIRQELHLMRKPIGTRNNP
ARTCRDLFYGHPDFKDGWYWIDPNLGMPDDAISVICNITNMGETCIFPDIHSSHMPSIPW
RKEDNKTDWYSYLRGGFRISYKTIGVVQMNFLRLLSQEAYQNFTYTCTNSVAWYDDENRS
YNLSLRLLGDNRDEFSYNSIRPYLITDECKSRNGKEETVFLIRTSKLQQLPLIDFYPIDY
GSPQQAFGFKVGPVCFK
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgcggctactggaccacgtaagagggcaatggagaacgctgcgatccacgtggatcatg
cttattgtacgttcgctgtttttgctcatcctatgcggtttgcagcgaaacacagtagat
gctgcgctgcaagatgcatcgaagaatgtgactgatataattgaagccacggggatgcaa
gagcaacttttcggagtgagaagaacggaaagtcgttgcagagatgatacgatcgcgtac
gatattatggaagctgcgattttgatggctcctaccaatgtattatttccggccggcata
ccacaagatttttctatcttggctgttgcaaagccgagagctagcgagtcaacgtccaaa
gattactctacgtcggtactttttactatctacggtgacagtggcgaagaacaattaatt
ctttcgttggagcgcgacattaaatttttctataacccaaatccggacgacagaaatgaa
cctatttcttttggtgtcgatatttccgacgggcaatggcatcgattaggagttagtatt
aaaggagatgccgttacgattattcttgattgcaatagacatattacaaaaaaattgcgg
aggaatttcgagaaaacgatcgctggcatccttatgattggacagcaacttaagggcgat
ttatatctgggaagtcttgagatgctgaaaattgctgtaaatccagacgctgcttacgaa
atctgtacaacgtttgcgccagattgtgaacatgaatcaagatatggactgaattataat
tcatctttcaacgaagatgattacgaagaagaaaacgagagtgacttagataaggacgat
aaccgggattttctacctcatggcacgatgacaaatacaattaacgttttgacatcaggg
acggagaattccacattttacgaaatggaaatgacgacaatagcgaatgtgtataatacg
gaatcaaatcatcagcagaattacggagaatcgataaataacccttacaatcatgaagaa
tatataaagcgttataatacccgaggttcacctgggctccgtgggtttcctgggccgcca
ggaggacccggctctcccggcgagaagggcgaacctggacgagatggattacccggattg
ccaggtgtatctggtccgccaggtaacgtcttcgtgatatcctcgttgaatcaacagggt
aacgaaaagggaccggattctcaggcagaaatgttgcggcagatgatatcacaacatatg
tttgcaatgagaggcgtagaaggcccgatgggccttacaggtgtcccgggtccagatgga
tcgcctgggcctcaaggtcagaagggagaacctggtgaaatcggcgaacctggacctaga
ggggaccaaggaagttctgggaatcttggcagagagggtaggagaggtcgtcccggcaga
gacggcgaacgcggtctcagtggactgccaggaatgaaaggcgagcaagggcaaatagga
ttaccaggtttaccaggtgataaaggcgaacgaggaccttcaggtaaatccggtgaacca
ggtttgccaggtcacgaaggaatgcagggtgaagacggtcctccaggtttaccaggtcta
cctggtgaattgggtccgagagggtttattggaccaagaggtttttctggattaccaggt
aatcctggtattcctggaaacgaagggccacccggtattaaaggtaatgctggtccactc
ggtccacctggtgcaccgggacaactaggacttacaggttcaataggaccacctggacct
cagggtccaccgggctcaatcggtttagttggtccacaaggaaagccaggaattcctggt
ctttcgggtgctgatggatctcctggacttccaggcaatcctggaatcccagcgacaaag
ggcgagcaaggtccatcaggtttacagggaccggtgggatttccaggtgttcgaggtgta
aagggtgacgaagggcaacgtggtctagcgggtgaacgcggtgaaaaaggtgatagaggt
ttggagggcgaaaagggcgacgcaggagcgaaaggagagcccggagctngcattcctggc
cttgaaggtttggaagggccgaaaggttttgagggacttcgtggtgagactgggcctgct
ggttcgcttggagaaaaggggaaggtaggcctaccagggtacgctggctatcctggaaat
cctggagaaaaaggagacaaagggcaaccaggaattcaaggaccaaacagcgataaagga
gaaagagggaacagcggattacaaggagaacgaggcacaacgggcccacggggttttaga
ggaactcgcggaagaagaggtgcggaagggttaccaggaccaaaaggcgatactggtcaa
ccaggacccgctggaccgtcaggcgagatcgggcctcccggtgttgaaggtccacgtgga
tttgcgggaccatcgggtccaccgggtctcgatggaaaagacggtataccaggtccatcc
ggtgagcgcggtccaactggtgaatcaggatctctaggacctccgggaattcccggtgtt
attggtcttccaggaccacttggagaacctggtcaaccaggcgagcctggagcatctggc
agttcgggggctccaggtgaaatcggtttaccgggtgaacaagggaaagaaggattacca
ggtccacctggcttgataggactcaaaggatcgccgggtcctggcggattaccaggattt
ccaggtgaaagaggtctgagcggtttaccggggttgcctggcttgaaaggtgaaatggga
cctatcggagctcaaggaccgcccggtgacaagggtattcaaggagatcccggaaaagac
ggatcaccaggtccagtagggaaacaagggtataaaggagataagggttccaccggcttc
aaaggcgaaaaaggcaatcctgggtcagctggaactataggtcgcgacggtctaccggga
caacggggtttaccaggcccacctggaccaattggttctccaggcgaagacggcgataaa
ggaaacgtaggttcacctggtgaaaaaggatttaaaggatctcaaggggacgtaggtctt
ccaggtccgcaaggagtacaaggaccacgtggtgaatctggtttagtaggtcctccagga
gagaaaggaccactgggtgagatgggacagcgagggccaaaaggcgaggtcggtccgacc
ggagcaactggatctgctggatctgtaggaccgagtggtttaccaggtcaaccaggtgta
aaaggtgaagttggagatcctggaacaattggtcctataggcctaccaggaattccggga
gagcgaggtccaagaggatccaagggctttaagggtccagaaggtccgatgggtccggag
ggtcaccaaggcgaaaaaggagacgaaggaatgtcaggacctcccggaaagccaggaata
gagggaaaacaaggagaaagaggtctaccaggaataaaaggagaggaaggtaaattagga
cttcttggacttcctggactacgaggattaattggtcccgagggaccaaaaggtgatgca
ggattatctggtcttcctggtccacctggagaacccggtctcatgggcgcgaaaggcgag
cctggaaaggacggcgaggatggacgagtaggtgatcctggcctactaggcgaaattgga
ctacctggcaaggaaggattaccgggttctcctggaaaatcgggtcccgaaggacctgcg
ggtcagcaaggtaatacaggtttgccaggagagaaaggagatatcggtctccctggagag
tctggtcttgaaggacctgtcggacctcaaggttcttctggtttgcctggcataccaggc
gaaagaggtttgccaggtgcggttggggaaaatggtcctgtaggtatgccaggagctgct
ggagctcctgggattattggactgattggttcaaaaggccagaaaggtgataaaggtcgt
agaggaattaaaggatatcgaggcgaaccgggattagttggaatcaaaggcgatcatgga
aagcggggagagaaaggtgatcgcggacttcctggaacacaaggattcaaaggaaatcct
ggacatcctggtcaggttggacctaaaggggaacaaggatttgttggtttattcggacca
ccgggaccgtctgggccaaaaggtaatggtggaaatgatgggatgcgaggtgacataggt
ccagcgggtccgccaggcccaccaggaccgcctggcttatcaataggacaattcgatttt
gacagaatatcaccgatgatatatcatgaccaatcaaccagaagaaaacgtgatgcttcc
gaggacatcgatgaagaggagatatttgacaggaagctttcagacataaacaaggctttt
tctaatatacgacaggaattgcatttaatgcgtaagccaattggtaccagaaacaatcca
gcgaggacatgcagagatttgttttacggacatcccgattttaaggatggttggtactgg
atcgatccaaatttaggcatgccagatgacgctattagtgtcatttgtaatatcacgaac
atgggcgaaacttgcatttttccagatattcacagtagtcacatgccgagcataccgtgg
agaaaagaagacaataaaaccgactggtactcgtatttacgtggaggatttagaataagt
tataaaacaatcggagttgtacagatgaatttcctacgtctacttagtcaagaagcttat
cagaattttacgtatacgtgcacgaacagcgttgcctggtacgacgacgagaatcgcagt
tacaatctctcgctgcgattactcggtgacaacagggacgaattctcgtacaatagtatc
aggccttatctcatcacggacgagtgcaagagtcgaaatggtaaagaggagactgtgttc
ttaattcgcaccagcaagttacagcagttaccgctgatcgatttttatccaatcgattac
ggatcaccacaacaagctttcggcttcaaagtcggcccagtttgtttcaaatag
DBGET
integrated database retrieval system
