Mycetomoellerius zeteki: 108724621
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Entry
108724621 CDS
T11078
Symbol
Hpr1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03013
Nucleocytoplasmic transport
mzt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108724621 (Hpr1)
09122 Translation
03013 Nucleocytoplasmic transport
108724621 (Hpr1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108724621 (Hpr1)
03041 Spliceosome [BR:
mzt03041
]
108724621 (Hpr1)
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
108724621 (Hpr1)
Spliceosome [BR:
mzt03041
]
Complex C
Other components
EJC/TREX
108724621 (Hpr1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108724621 (Hpr1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
DUF8772
Carbpep_Y_N
Motif
Other DBs
NCBI-GeneID:
108724621
NCBI-ProteinID:
XP_018306573
LinkDB
All DBs
Position
Unknown
AA seq
662 aa
AA seq
DB search
MAMFEVLRKDYSDYLRQYFKLSDVSLFQKKCIERCANDSDRKAAIDQALRDTLLAVLTDN
ASGNVRSLESYITFCIELCRKDLATASMPVMLLGDIFDSMTLDRCEQLFTFVENNVTVWK
EDLFFTACKNNLLRMCNDLLRRLSRSQQTVFCGRILLFLAKFFPFSERSGLNIVSEFNLE
NQTEFGLEKAEEDDLEQITKDDDKSESKIPIDYNLYRKFWALQDFFRNPNQCYNKMHWKV
FSAHASNVLSAFASFKLEEQRSYPSTCIKMDTSMEGSHKETHYFAKYLTNQKLLELQLSD
SNFRRYVLLQFLILFQYLNSTVKFKAFLASGYETSETHELKPDQVEWVKTITEQVYTLLT
ETPPDGPTFAETVKNILKREEHWNTWKNEGCPPFKRPASDISDEEPRKPRRPKRRIGDVI
RDAQTVGKYHMGNPELTKLWNLCPNNLEACKSKDRDFLPSLETYFEDAIMELDPAAMVDD
KYKKVNDGNFGWRALRLLARRSPHFFVHGNYPINKLPEYLETMIKKIAKDRPQTQSDTKL
ETEETPPSESTDQEFNEDVLKQESEQVDAESADVKARKLNKVTPEMVAKLSESLKNDWKK
LATKFGYTNDEIAFFQSKTTPYEQCKTMLEIWAEEDEDASVENLVYILEGLKYTEALAVL
KS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgttcgaagtgttaaggaaagactacagcgattatttgcggcagtatttcaag
ctgtcggacgtctcgttatttcaaaaaaagtgcattgaacgttgtgcaaatgacagtgac
agaaaagcggcgatcgaccaggcgctccgagatactttactggccgtactgacggataac
gcttcgggtaacgtgcgttccctcgaatcgtatatcacattctgtatagagctatgtaga
aaggatcttgcgacggcgagtatgccagtgatgctactgggtgatatcttcgattcaatg
acgctcgacagatgcgaacagttatttactttcgtggagaataatgtcactgtatggaag
gaagacttgttttttactgcctgtaaaaataacttgttgagaatgtgcaacgatctccta
aggagactgtcgcgttcacagcaaactgtattttgcggtagaattttactattcctagca
aagttctttcctttctctgagagatctggcttgaatatcgttagcgagtttaatttagaa
aatcagacagagtttggcttggagaaagcagaggaagatgacttagaacagattactaag
gatgacgacaagtcagaaagcaagataccaattgattacaatttgtacagaaagttttgg
gcattacaagatttcttcagaaacccaaatcagtgttataataaaatgcactggaaggtc
ttttcagctcatgcgtctaatgtgttatcagcatttgcttcttttaaattggaggagcaa
cgtagttacccttctacatgcatcaagatggatacttctatggaaggttcccacaaagag
acgcattattttgctaaatacttgaccaatcaaaaattactggagttgcaactgtcagac
tccaatttcagacgatatgtattgctgcaatttctcattcttttccagtatctgaatagc
actgtaaaatttaaggccttccttgccagtggctatgagacaagtgagacacacgaactc
aagccagatcaagtggaatgggtgaagactattactgaacaagtttatactttactgacc
gaaacaccgcctgacggccccacgtttgcggagactgtgaagaacatcttgaaacgcgaa
gaacattggaatacatggaagaatgaaggttgtccaccattcaaacgaccagcatcggat
atcagtgatgaagagccgcgaaaaccgagaagaccgaaacgacgtatcggtgacgtaatt
agagatgcacaaacagttggcaaatatcacatgggaaatccagaacttactaaattatgg
aatttatgtccaaataatctcgaggcatgcaaatctaaggatagagattttctgccgtct
ttagaaacgtattttgaagatgctataatggaattggatcctgctgcaatggtcgatgat
aaatacaagaaggtgaacgatggtaattttggttggagagcgttaagattgttagcgaga
cgaagcccgcatttctttgttcacggcaattatcctataaataaattgcctgaatatctt
gagacaatgattaagaagattgccaaagatcgtccacagacacagtctgatacgaaattg
gaaactgaggagacaccgccatcggaatctaccgatcaagaattcaatgaagacgtcttg
aaacaggaaagtgagcaggttgatgctgaaagtgctgatgtaaaagccagaaaattgaac
aaagtcacaccagaaatggtggcaaaattatcggaaagcttaaaaaatgattggaaaaaa
ttagcgaccaaatttggatatacaaatgatgagattgctttcttccaaagcaaaacaacg
ccatatgaacaatgtaaaactatgcttgagatatgggcggaagaagatgaagatgcatca
gttgaaaatttagtttatattttagaaggtttaaaatatacagaggcattagccgttcta
aaatcttaa
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integrated database retrieval system
