Mycetomoellerius zeteki: 108725411
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Entry
108725411 CDS
T11078
Symbol
Hel25E
Name
(RefSeq) ATP-dependent RNA helicase WM6 isoform X1
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03013
Nucleocytoplasmic transport
mzt03015
mRNA surveillance pathway
mzt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108725411 (Hel25E)
09122 Translation
03013 Nucleocytoplasmic transport
108725411 (Hel25E)
03015 mRNA surveillance pathway
108725411 (Hel25E)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108725411 (Hel25E)
03041 Spliceosome [BR:
mzt03041
]
108725411 (Hel25E)
Enzymes [BR:
mzt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108725411 (Hel25E)
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
108725411 (Hel25E)
Spliceosome [BR:
mzt03041
]
Complex C
Other components
EJC/TREX
108725411 (Hel25E)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
108725411 (Hel25E)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108725411
NCBI-ProteinID:
XP_018307922
LinkDB
All DBs
Position
Unknown
AA seq
471 aa
AA seq
DB search
MGDRSIFGGIVRGGGHYANVFPAKSFILKRYFAPKTYQSDQDTMADNDDLLDYEDEEQTE
QVVDGSGDVPSKKEVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAV
LGMDILCQAKSGMGKTAVFVLATLQQLELAENQVYVLVMCHTRELAFQISKEYERFSKYM
PHVKVGVFFGGLPIQKDEEMLKTVCPHIVVGTPGRILALVRNKKLNLKHLKHFILDECDK
MLELLDMRRDVQEIFRSTPHSKQVMMFSATLSKEIRPVCKKFMQDPMEVYVDDEAKLTLN
GLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMALAQLLTEQNFPAIGIHRG
MTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYDMPEDSDTYLHRVARAGR
FGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASYSKFNLSKI
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaccggtccattttcggcggcattgtccgaggcggcggccattacgcgaacgtt
tttccggcaaaatcgttcatcttgaagcggtattttgcgccgaaaacctaccaaagtgat
caagatacaatggcggataacgatgatcttttggattatgaagacgaagaacagactgag
caggtagtcgatggaagcggagatgttccatcaaagaaggaagtcaagggtacatatgtc
tctatccacagcagtggatttagagatttccttttgaagccagaaattcttcgtgctatt
gtcgactgtggttttgaacatccatctgaagtgcaacacgaatgtattcctcaagcagtt
cttggcatggatatactgtgccaagcaaaatcgggtatgggaaaaacggctgtatttgta
ttagctactcttcagcagttggaattagcagagaaccaagtctatgtcctagtaatgtgt
cacactcgagaattggcttttcaaatcagtaaagaatatgagaggttcagcaaatacatg
ccacatgtgaaagttggcgtattcttcggtggtttacctattcagaaagatgaagagatg
ttgaagactgtgtgtcctcatattgttgtcggcacccctggtcgtattcttgctcttgta
cggaataagaaattgaatctaaaacacctgaaacatttcattcttgacgaatgcgacaag
atgcttgaattattagatatgcgccgggacgtacaggaaatattcagaagcacaccgcac
agcaaacaagtcatgatgttcagtgccacgctgtccaaggagatacgtcctgtctgcaaa
aaattcatgcaagatcccatggaggtctatgtcgatgacgaggcgaagctcactttgaac
ggtctccagcaacattacgttaaattgaaggagaacgagaagaacaagaagttgtttgaa
ctacttgatgttcttgagtttaatcaggttgtcatatttgtgaagtctgtacaaagatgt
atggctttagcacaacttttaacggaacagaatttccctgcgattgggattcatcggggc
atgacgcaagaggagcggttatccagatatcaacagttcaaagattttcagaaacgtatt
ttggtggcgacaaacctgtttggacgtggaatggatatagaacgtgtgaatattgtattc
aattatgatatgccagaagactccgatacatatttgcatagagttgcgcgtgctggtcgt
tttggtacaaagggtcttgccattacattagtaagcgatgaaagcgacgcgaagatattg
aatgatgttcaagaaaggtttgacgtaaatattacagaattaccggacgaaatcgacctc
gcttcatacagtaagtttaacttatcaaaaatttaa
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