Mycetomoellerius zeteki: 108727287
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Entry
108727287 CDS
T11078
Symbol
RpII215
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03020
RNA polymerase
mzt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
108727287 (RpII215)
09124 Replication and repair
03420 Nucleotide excision repair
108727287 (RpII215)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzt03021
]
108727287 (RpII215)
03400 DNA repair and recombination proteins [BR:
mzt03400
]
108727287 (RpII215)
Enzymes [BR:
mzt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
108727287 (RpII215)
Transcription machinery [BR:
mzt03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
108727287 (RpII215)
DNA repair and recombination proteins [BR:
mzt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
108727287 (RpII215)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
RNA_pol_Rpb1_R
Motif
Other DBs
NCBI-GeneID:
108727287
NCBI-ProteinID:
XP_018310848
LinkDB
All DBs
Position
Unknown
AA seq
1906 aa
AA seq
DB search
MATSDSKASLRTVKRVQFGILSPDEIRRMSVTDGGIRFPETMEGGRPKLGGLMDPRQGVI
DRNSRCQTCAGNMTECPGHFGHIDLAKPVFHVGFITKTIKILRCVCFYCSKLLVNPHNPK
IKEIVMKTKGQPRKRLAFVYDLCKSKNICEGGDEMDINKENAENQPQLDRKPGHGGCGRY
QPNLRRSGLDVTAEWKHVNEDSQEKKIILSAERAWEILKHIKDEESFILGMDPKFARPDW
MIVTVLPVPPLSVRPAVIMYGSAKNQDDLTHKLADIIKSNNELVRNEQSGAAAHVISENI
KMLQFHVATLVDNDMPGMPRAMQKSGKPLKAIKARLKGKEGRIRGNLMGKRVDFSARTVI
TPDPNLRIDQVGVPRSIAQNLTFPEIVTPFNIDKMQVLVRRGNSQYPGAKYIVRDNGERI
DLRFHPKSSDLHLQCGYRVERHIRDGDLVIFNRQPTLHKMSMMGHRVKVLPWSTFRMNLS
CTSPYNADFDGDEMNLHVPQSMETRAEVENIHVTPRQIITPQANKPVMGIVQDTLTAVRK
MTKRDVFIEKEQMMNLLMFLPSWDGKMPQPCILKPKPLWTGKQLFSLIIPGNVNMIRTHS
THPDEEDDGPYKWISPGDTKVMVEHGELVMGILCKKTLGTSAGSLLHICMLELGHEVCGR
FYGNIQTVINNWLLLEGHSIGIGDTIADPQTYLEIQKAIKKAKEDVIEVIQKAHNMELEP
TPGNTLRQTFENQVNRILNDARDKTGGSAKKSLTEYNNLKAMVVSGSKGSNINISQVIAC
VGQQNVEGKRIPFGFRKRTLPHFIKDDYGPESRGFVENSYLAGLTPSEFYFHAMGGREGL
IDTAVKTAETGYIQRRLIKAMESVMVHYDGTVRNSVGQLIQLRYGEDGLCGETVEFQNLP
TIKVSNKAFEKKFKFDPTNERYLRRIFNEDIVREMMGSGEVISELEREWEQLNRDRTVLR
EIFPSGESKVVLPCNLQRMIWNVQKIFHINKRAPTDLSPMRVIQGVKNLLEKCIIVAGDD
RLSKQANENATLLFQCLVRSTLCTKCVSEEFRLSSEAFEWLIGEIETRFQQAQVSPGEMV
GALAAQSLGEPATQMTLNTFHFAGVSSKNVTLGVPRLKEIINISKKPKAPSLTVFLTGAA
ARDAEKAKNVLCRLEHTTLKKVTANTAIYYDPDPQNTVIAEDQEFVNVYYEMPDFDPTKI
SPWLLRIELDRKRMTDKKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIRIMNSDDN
KFQDTDEETVDKMEDDMFLRCIEANMLSDMTLQGIEAIGKVYMHLPQTDSKKRIVITETG
EFKAIAEWLLETDGTSLMKVLSERDVDPVRTFSNDICEIFQVLGIEAVRKSVEKEMNAVL
QFYGLYVNYRHLALLCDVMTAKGHLMAITRHGINRQDTGALMRCSFEETVDVLLDAASHA
EVDPMRGVSENIIMGQLPRIGTGCFDLLLDAEKCKSGIEIPMAVGAGMMGTAGMFFGSVT
GMSSMSPQMTPWMGATPGYGASNMSPALSSGMTPGGACFSPSGASDASGLSPAYSAYSPQ
PGSPGSPGPSMSPFPMSPAGAASPSYSPTSPAYLPTSPSMTPSSPNYSPTSPTYSPTSPN
YSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPT
SPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPSSPNY
TPASPSYSPTSPSYSPSSPQYSPASPSYSPSSPKYSPTSPSYSPTSPSFAGTSPQYTPAS
PTYSPTSPTYSPTSPSYSPSSPQHTTSGSTRYSPSSPNYSPTSPTYSPTSPQYSPSSTKY
SPTSPTYTPTSPSYSPTSPTYSPPVPGYSPTSPTYSPASPAYETDD
NT seq
5721 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatccgattccaaagcgtctttgcggacggtgaaacgcgttcaattcggaatt
ctttcacccgacgaaatacgtcgtatgtcagtcaccgatggcggcatacggtttcccgaa
actatggagggtggccgccctaaactgggcggtcttatggacccgaggcaaggtgttatc
gacaggaattccaggtgtcaaacttgcgccggcaacatgacagaatgccctggtcacttt
ggtcatatagatctagcaaaaccagtattccatgtgggattcattacaaaaactataaag
atattgagatgcgtgtgtttttactgttccaaactacttgtcaaccctcataatccaaag
ataaaagaaatcgtcatgaagacgaaaggacagccgcgaaagcgactcgctttcgtttat
gatctatgcaaaagcaagaacatctgtgaaggcggagatgaaatggatattaataaggag
aacgcggagaaccaaccacaattggacagaaaaccaggtcatggtggttgtggtagatat
cagcctaatcttaggcggtccggcttggatgtcactgcagagtggaagcacgtgaatgaa
gattcgcaagagaagaagataattctctcggccgagagggcctgggagatcttgaaacac
attaaagatgaagaatctttcatcttgggcatggacccgaaatttgcacggccagattgg
atgatcgtcaccgtattgccggtaccaccactgtctgttagacctgcggtcattatgtac
ggttccgctaagaatcaggatgatctaacgcacaaactggcagacattatcaaatcaaac
aacgaattagtacgaaatgaacagtctggcgcagcggcacacgtaatttctgagaatata
aagatgctacagtttcacgtagcgacgctcgtcgacaacgacatgcccggtatgccccgg
gcgatgcagaagtcgggcaagccgctcaaagccatcaaggcccgactgaaaggaaaggaa
ggcaggattcgtggaaatctgatgggtaaacgtgtggacttctctgcgcgtactgttatc
actcctgatcccaatttgcgtatcgatcaagtaggcgtaccacgcagtatagcgcaaaat
ctgacattccccgagatcgtgacgccctttaacatcgataagatgcaggtgctagtcagg
cgtggcaattcgcaatatcctggtgcaaagtacatagtacgcgacaacggcgaaagaatt
gatctgcgtttccatcccaagtcctcggatctgcatctgcaatgcggctaccgagtggaa
cgacatatccgcgacggcgatctcgtaatcttcaatcgtcagcctactctacacaagatg
agtatgatgggtcatcgtgttaaggtgcttccgtggagcacattccgcatgaatttaagc
tgcacttcgccatacaatgctgactttgacggggatgaaatgaatttacacgttccacag
tcgatggagacacgcgcggaggttgagaacattcatgtgactccacgacagattattacc
ccacaggcaaataaaccggttatgggaattgtacaggatactctgacagcagtcaggaaa
atgaccaagcgcgacgtgttcatcgagaaggagcaaatgatgaatctactcatgtttcta
cctagctgggatggcaagatgccgcaaccgtgtattctgaaaccgaaaccgctgtggact
ggcaagcagctattctctcttattataccaggcaacgtgaacatgatacggacgcatagc
acacatcctgacgaagaagacgacggtccatacaagtggatctcgccgggtgacacaaag
gtaatggtggaacatggagaacttgtgatgggtattctctgcaagaagaccctaggtacc
tcagctggttctttgcttcatatttgtatgctcgagttgggccatgaagtgtgcggacgc
ttttatggcaatattcaaacagtcatcaacaattggctattactagagggtcattcgatt
ggtattggtgacactattgctgatccgcagacatatttggaaatccagaaggcaatcaag
aaggccaaagaggacgtgatagaagtaattcaaaaggcacacaacatggaacttgagcct
acgcctggcaacacgcttcgtcagactttcgagaatcaagtaaacaggattctgaacgat
gctcgagacaagaccggaggctccgctaagaagtccttgacagaatacaataatttgaag
gccatggtggtgtcaggctcaaaaggttccaacatcaacatctctcaggttatcgcttgt
gtaggccagcaaaatgttgaaggtaaacggataccctttggtttccgtaagagaacactg
ccacatttcattaaggatgattacggaccagagtcccgtggttttgtcgagaattcatat
ctcgctggtctcacgccctcagagttctactttcacgcaatgggcggtcgtgaaggtctt
atcgataccgccgtaaagacagctgagactggttacattcagcgtcgtttgataaaggct
atggaatcggtgatggtgcactatgacggcaccgtgcgtaattccgtcggtcaattgatt
cagctgcgttacggagaggatggtctctgcggcgagaccgtcgaattccagaatctacca
acgatcaaggtaagcaacaaggctttcgagaagaaattcaaatttgatcccaccaatgaa
cgatacctacggcgtatatttaacgaggacatcgtccgggaaatgatgggctccggtgag
gtgatatccgaactagaaagagaatgggaacagttgaacagagatcgtactgtactccgt
gagatcttcccgagcggagaatccaaagttgtactgccctgcaatctacaaaggatgatt
tggaacgtacagaagatattccacatcaataagcgagcgccgaccgatctcagtccaatg
agggtcattcaaggcgtaaagaaccttctggaaaagtgtatcatcgttgccggggatgac
agattgagcaaacaagcgaacgagaacgcaacattactgttccagtgtttagtaagatcg
actttatgcaccaagtgtgtctctgaggagtttaggctatccagtgaggccttcgagtgg
ctaattggagaaatcgagacaagattccagcaggctcaagtatcacccggcgagatggtc
ggcgcattggcggcgcaatctctcggcgaacctgccactcagatgaccctgaatactttc
cacttcgctggtgtatcatcgaaaaacgtaactcttggtgtgcctagattgaaagaaatc
atcaacatcagtaagaagccaaaggcgccgtcactcacggtgttcttgacgggtgctgcc
gcgcgtgatgccgagaaggcgaagaacgtgctttgtcgactggaacacacgacgttgaaa
aaggtgacggcaaacacggcgatatactacgatccggatccgcagaacacagtaattgcc
gaagatcaggagttcgtcaacgtgtactacgagatgcctgactttgatcccacgaaaata
tcgccgtggttactgcgaatcgagctggacaggaaacgaatgactgacaagaagttgaca
atggaacaaattgcggagaagatcaacgctggctttggcgacgatttgaactgcatattc
aatgacgataacgctgagaagttggtactgcgcatcagaataatgaacagtgacgacaac
aagttccaggacacggacgaggagactgtagataagatggaggacgatatgttccttcgc
tgtatcgaagccaacatgcttagtgatatgactctacagggcattgaagctatcggaaaa
gtttacatgcatctgccacaaacggattctaagaaacgcattgttatcacggaaactggc
gaattcaaagccatcgcggaatggctcttggaaaccgacgggacgagcttgatgaaggtg
ttgagcgagagagacgtggatcccgtgcggacgtttagcaatgatatttgcgaaatattc
caagtactcggcatcgaagccgtgcgaaaatcggtagaaaaagaaatgaatgcagtgttg
caattctatggtctttacgtcaactatcgacatcttgccttgctttgcgacgtcatgact
gcaaagggtcatcttatggcgataacacgtcatggaatcaatagacaagacaccggtgct
ttaatgaggtgttccttcgaagaaacggttgatgtattgttggatgcagcatctcacgca
gaagtagatccaatgagaggagtatctgaaaatattattatgggacaacttcctcgaatt
ggaacaggatgctttgatctattactggacgcggagaaatgtaagtctggcatcgaaatt
cctatggcagttggagcaggtatgatgggaacagcgggaatgtttttcggcagcgtaact
ggcatgtccagtatgagtcctcaaatgactccttggatgggagctactcccggttatggt
gcatcgaatatgtcgccagctttgagcagcggtatgacgccaggtggtgcatgtttctcg
ccatcgggagcatcggacgcatcgggcttatcgccagcatattctgcttattcaccacag
ccaggaagccccggcagtccaggtccaagtatgagtccattcccaatgtcgccagctggt
gcggcatcacctagttattctccaacgtcaccagcgtatttacctacatcgcctagcatg
acaccatcgagtccgaattattcgcctacaagtccaacatattcgccgaccagtccaaat
tattcaccgacatcaccaagctactctccgacaagtccgagttactcgccaacctcacca
agttattcgccaacaagtccaagttactcgcccacatctccaagttattcgccaacgagt
ccgagttactcgcctacttcgccaagctattcaccgaccagtccgagttattcgcctacg
tcaccaagctactcaccaacttcgccgagttactcgccaacgagcccgagttactcgcca
acctcaccaagttattctccaacaagtccaagttactcgcccacgagtccaagctattcg
cctacgagtccgagttactcaccaacatcgccgagctattcaccaagctcgcccaactac
acacctgcttcaccctcgtattcgcccacttcacccagttattcgccaagctcgccgcaa
tactcgcccgcgagtccaagttattcccccagcagtcccaaatattcaccgacgagcccg
agttattctcctacctcaccgtcatttgccggtacatcgccgcaatacacacctgcgagt
cccacatactcgccaaccagcccgacatattcacctacaagtccgtcgtactcgccgagt
tcgccgcagcatactacatctggcagcacccgatattcacctagcagtccgaactattcg
cctaccagtccaacgtactcgcctacaagtccacagtattcgccgtcaagcaccaaatat
tcacccacaagtcctacctatacgcctacaagcccgagttattctccgacgagtccgacg
tactcgccgcctgtaccgggatactcgcccacgagtcccacgtactcgccggcgtcacct
gcttacgagacggatgactaa
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integrated database retrieval system
