Mycetomoellerius zeteki: 108727738
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Entry
108727738 CDS
T11078
Name
(RefSeq) probable ATP-dependent RNA helicase YTHDC2
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
mzt Mycetomoellerius zeteki
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mzt03041
]
108727738
Enzymes [BR:
mzt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108727738
Spliceosome [BR:
mzt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
108727738
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
Helicase_C
DEAD
Ank_2
Ank
HA2_N
nSTAND3
AAA_19
Ank_4
AAA_22
Ank_5
ATPase
PhoH
UvrA_inter
AAA_14
NPHP3_N
SRP54
Motif
Other DBs
NCBI-GeneID:
108727738
NCBI-ProteinID:
XP_018311462
LinkDB
All DBs
Position
Unknown
AA seq
1153 aa
AA seq
DB search
MLRRKQQRHRPIGEDTRIAVNLTVKKLLSSPDQKELEFPSSYTAEERAYIHELARELGLK
SKSRGKGTNRFLTVYKREGSTIVQADAVIKLQKHSKQGIYNLMQTFPLNHKECQDLLPPI
ERERPLNNDVNTNTKAMGRLNNSIPQVPQLKTNFDVLQFRKSLPIFNAREEILSALGNHQ
VIIIAGETGCGKTTQVPQYILEHYQQKHQPCRIICTQPRRLSAVSVAERVAFERDEKIGQ
TFGYQIRLESRVAPKTLLTYCTNGVLLRTLMGGDSALTTLTHIIVDEVHERDRFCDFLLI
ALKDALVKYRSLKLILMSATMDTTIFAKYFNKCVVVNVPGRSYDVDAYFLEDILKMTCYM
TKEMLVKKKEFLKWKDKQKTLESWKQYKPQHSNKSTKSEKSLLPAPILAQQNDPIPEKVK
LEPWLIEEMDKSIFDAWVNGREDNFAQLLHFILSENVSVDYQHSETFITPLMAAAARGCI
NTTEQLLNLGANLNLRSANDWTALDWAKNRNHTECAELIEAYMKTYDCVVPNNELAQVTE
TSLSEEDKLLLDVYHHTFNDDNIDYDLLLELVFYIHLKMPAGSILIFLPGYDDIVTVKEK
INAEDKKMNQGLRYNLFVLHSNMQTCDQKKVFKPSPQGTRKIILSTNISETSITIDDVVY
VIDSGKVKEKSFDAISSVCTLTSNWISQACAKQRKGRAGRCRRGICYRLFSSIRYNNMQA
YQTPEILRLPLQELCLYTKHLTSGNTPIAEFLDKALEPPSNVVTRNAVQLLKTIDALDPW
EDLTELGSHLLDLPIEPRLGKMLLYAVVLKCLDPILTIVCSLAYKDPFILPSQPSQKRAL
TAARKKFATGTYSDHMVVLRAFQGWQNARATGKERAFCEKNFISAPVMEMVVGMRTQLLG
QLRASGFVRARSPGDIRDLNSNSENWAVVKAALTAGLYPNLIRVDREHMQLRTQKEVKVF
FHPSSTLRDYPKSSRMTSAQTHCTNVQSLPCDWLLYEEMSRTGRFCHVKVVTVVNPLTVA
LFSGPARLPMDVIYEAEAVPESESDSEVDEFHEGTIFKLDDWVVFKLDPETAQLFLHLRQ
KWNALFLRRMKAPNKAMSALDEKVINTLVTVITNEEQACGLQQPAGIGQRPRPLIVDYYP
ANVRRDDYPERYF
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgaaggaaacagcaaaggcatcgccccatcggggaagatacccgaatcgcagtg
aacttgactgtaaaaaaattgttgagcagtccggatcagaaggagctggagtttccatcg
tcgtacacagcagaggagcgggcgtacatccatgaattggctcgagaacttggcttgaag
tcaaaaagtcgagggaaaggtacaaatcggtttttgacagtgtacaagagagaaggttca
acaatagttcaagctgacgctgtgataaaattgcagaaacattcgaagcagggtatatat
aatttaatgcagactttcccattaaatcacaaggaatgccaagacttgcttcctccgatt
gaaagagaacgccctcttaataatgatgtaaatacgaatactaaggctatgggaaggtta
aacaacagcataccacaagttcctcaattaaaaactaattttgatgtgctgcagttccga
aaatctctgccaatttttaacgcgagggaggaaattcttagtgcactaggcaatcatcaa
gtgatcataatagcaggtgaaaccggatgtggcaaaaccacgcaggtgccacaatatatc
ttggaacactatcaacagaagcatcaaccttgtagaatcatttgcacacagcccaggcgc
ttgtcggcagtatctgtggccgagagagtggcgttcgaaagggacgaaaaaatcggccag
actttcggatatcagataagattggaaagtagagtagctcctaaaactcttctaacgtac
tgtacgaatggagtattgcttaggactttaatgggcggcgattccgctttaactacgctc
acgcacatcattgttgacgaggttcacgaacgtgacagattctgtgacttccttttgata
gctttgaaagatgcattggttaaatatcgttccttgaagctgatacttatgagcgccacg
atggatactactatctttgccaagtatttcaataagtgcgtagttgttaacgttcctggt
cgatcatacgacgtggatgcatactttttggaagatattttaaaaatgacctgttacatg
acgaaggaaatgcttgtaaagaagaaggaatttttaaagtggaaagataaacagaagact
ttggaatcttggaaacaatacaagcctcagcattcaaataaaagtaccaaaagtgagaag
agtttattacctgctccaattttagcccagcaaaacgatcctataccggagaaagttaag
ctagaaccctggctgatagaggaaatggacaaaagtattttcgatgcatgggtaaacggt
agagaggataattttgcgcaacttttacattttatactatctgaaaatgtttctgtagat
tatcagcattcggagacttttataacaccgttgatggctgccgcagctagaggttgcata
aacacaactgagcaacttctaaatctaggtgcgaatctcaatttgaggtctgctaacgat
tggaccgcgttagactgggcaaagaacaggaatcataccgaatgtgctgaattaatcgaa
gcttacatgaaaacttacgattgtgtggtaccgaataacgaactggcgcaagtcacggag
acatcgctctccgaagaagataaattattactcgatgtatatcatcatacgtttaacgac
gataatatcgattatgatctattattagaattggtcttttacattcatttaaaaatgcct
gccggctctattttgatatttttaccaggatacgacgatatagtcacagtgaaagaaaaa
attaatgcagaagacaagaagatgaatcaaggtttacgctacaatttgttcgttcttcac
tcgaacatgcagacttgcgatcagaagaaggtgtttaaacctagtcctcagggcacgcga
aagattatcctttccacgaatatatcagagaccagcattacaatcgacgatgtcgtgtat
gtcattgattctggaaaagttaaagaaaagtctttcgatgctatatcaagtgtttgtaca
ttgacttccaactggatatctcaagcttgtgcaaagcaacggaaaggtcgagcggggaga
tgcaggagaggaatctgctatcgtttgttctcttcgatccggtacaataacatgcaggct
tatcaaacacctgaaattctacgattaccgctgcaagaactctgcttatacacgaaacat
ttaacgtcgggaaacacacctatagctgaatttctggataaagctctggagccgccgtct
aacgtagtcaccaggaacgcagtacaattattaaagacaatcgatgcattagatccgtgg
gaagatttaactgagttaggcagtcatttactagatttaccaattgaaccaagactcggg
aagatgctgttatatgccgttgtcctcaaatgtttggatcccattttaacaattgtttgt
agtttagcatacaaagatccttttatattaccatcacaaccgtcgcaaaagagagctttg
accgcggcacgaaaaaaatttgccaccggaacgtactctgatcatatggtagtcctgcga
gcgttccaaggctggcaaaacgccagagcaaccggcaaggaacgcgccttttgcgagaaa
aatttcatctctgctcccgtgatggagatggtagttggaatgcgtacccagcttctcgga
cagttgcgcgcgtctggctttgtcagagccagaagccccggggacattcgagacttaaat
tcgaattcggaaaattgggctgtcgtgaaagcggccttgaccgcgggcttgtatcccaac
ttaattcgagttgatcgggagcacatgcaactacggacacagaaagaggtcaaggtattc
tttcatccctcgtcaacgttaagagattatccaaaatcttcgaggatgacgtcagcgcaa
acgcattgtaccaatgtgcaatccttgccgtgcgactggctgctttatgaggaaatgagt
cgtacaggacgtttctgtcacgtgaaagtcgttacagtcgtgaatccattaactgtagca
ttatttagtggaccagctagattaccaatggatgtaatctacgaagctgaagctgtaccg
gaaagtgaatcggattcagaggttgatgaatttcatgaaggaaccatttttaaacttgat
gattgggtggtgtttaaacttgaccctgaaacggctcaactatttttacatttgcggcag
aagtggaacgccttgttcctcagacgtatgaaagcaccgaacaaggcaatgtcggcgtta
gacgagaaagtcattaacactttggtaactgtaatcacaaatgaggaacaggcgtgtggc
ctccagcagcccgctggcatcggccaacgtccacgtccgttaatcgtcgattattatcct
gcaaatgttagaagagacgattatccggaaagatatttctaa
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integrated database retrieval system
