Mycetomoellerius zeteki: 108727838
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Entry
108727838 CDS
T11078
Symbol
U2af50
Name
(RefSeq) splicing factor U2AF 50 kDa subunit isoform X1
KO
K12837
splicing factor U2AF 65 kDa subunit
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108727838 (U2af50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mzt03041
]
108727838 (U2af50)
Spliceosome [BR:
mzt03041
]
Complex A
U2 snRNP components
U2 related factors
108727838 (U2af50)
Complex B
108727838 (U2af50)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_MUD2_C
DUF8489
RRM_7
DUF8400
RRM_9
Motif
Other DBs
NCBI-GeneID:
108727838
NCBI-ProteinID:
XP_018311609
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MGEDFNGDRDRQDRDKDRDRDRDRDRRHRSRSRDRRKRSRSRSKERRDRKRSNSPKKSRS
SRRRKPSLYWDVPPPGFEHITPLQYKAMQAAGQIPANIVADTPQAAVPVVGSTITRQARR
LYVGNIPFGVTEEEMMEFFNQQMHLSGLAQAAGNPVLACQINLDKNFAFLEFRSIDETTQ
AMAFDGINFKGQSLKIRRPHDYQPMPGMTDNPSMNVPGTVPDSPHKIFIGGLPNYLNEEQ
VKELLMSFGQLRAFNLVKDSATGLSKGYAFCEYVDVSMTDQAIAGLNGMQLGDKKLIVQR
ASVGAKNPMIGAQAPVQIQVPGLSMVGTSGPATEVLCLLNMVTPEELMEEEEYEDILEDI
KEECNKYGVVRSVEIPRPIEGVDVPGCGKVFVEFNSVIDCQKAQQTLTGRKFNNRVVVTS
YFDPDKYHRREF
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagattttaacggagatcgtgatagacaagatcgggataaggacagagatcgg
gatagagaccgtgacaggcggcatcgatcacgcagtagggatcgcagaaagcgctctcgt
tctcgctccaaagaacgcagagacagaaaaagaagtaattcaccgaaaaagagtcgtagc
tctagaagaagaaagccatctttgtattgggatgtaccaccacctggttttgaacacatt
actcctttgcagtataaggctatgcaagctgctggacaaatacctgcaaatattgtagca
gatacaccacaagcagcagtgcctgtagttggtagcactataactcgccaagcaagaaga
ctttacgtagggaacattccattcggtgtcactgaggaagaaatgatggagtttttcaat
caacagatgcatctctctggacttgcacaagccgctggaaatccagtattggcgtgtcaa
attaatttagacaaaaatttcgcatttttggagttccgatcgatagacgaaactacgcaa
gctatggcattcgatggcataaatttcaaagggcagagtctgaagataagaaggccacac
gattatcagccaatgccgggaatgaccgataatccaagcatgaacgtgccaggtacggtt
cctgattctccgcataaaatcttcattggtggtttaccaaattatttgaacgaggaacag
gtgaaagaactattgatgagctttggacaactgagggcgttcaatctagtaaaggattct
gcgaccggtctctccaaaggatatgcgttctgtgaatacgtagacgtttcgatgactgac
caggcgatcgccggattgaatggaatgcaactgggtgacaagaaattaattgtgcaacgc
gctagcgttggtgctaaaaatcctatgataggagcgcaagctccagtacaaattcaagtg
cctggtttgtcaatggttggcacgagcggacctgcgactgaagtgctttgtttgctcaat
atggtcacgccagaagagctaatggaagaagaagagtacgaggacattctcgaagacatt
aaagaagagtgtaacaaatacggagttgtccgatctgtggagattcctagacccatcgag
ggtgttgatgttcctggctgcggcaaggtattcgtagaattcaatagcgtgattgactgc
caaaaagcgcaacagactctcacgggccgaaagttcaataatcgcgtcgtagttacatcg
tacttcgatcccgacaagtaccaccgtagagaattctaa
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