Mycetomoellerius zeteki: 108727927
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Entry
108727927 CDS
T11078
Symbol
Mtr4
Name
(RefSeq) LOW QUALITY PROTEIN: superkiller viralicidic activity 2-like 2
KO
K12598
ATP-dependent RNA helicase DOB1 [EC:
5.6.2.6
]
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
108727927 (Mtr4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108727927 (Mtr4)
03041 Spliceosome [BR:
mzt03041
]
108727927 (Mtr4)
03009 Ribosome biogenesis [BR:
mzt03009
]
108727927 (Mtr4)
03016 Transfer RNA biogenesis [BR:
mzt03016
]
108727927 (Mtr4)
Enzymes [BR:
mzt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
108727927 (Mtr4)
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
TRAMP complex
108727927 (Mtr4)
Spliceosome [BR:
mzt03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
108727927 (Mtr4)
Complex C
U4/U6.U5 tri-SnRNP related factors
108727927 (Mtr4)
Ribosome biogenesis [BR:
mzt03009
]
Eukaryotic type
Pre-60S particles
Helicases
108727927 (Mtr4)
Transfer RNA biogenesis [BR:
mzt03016
]
Eukaryotic type
tRNA degradation factors
TRAMP complex
108727927 (Mtr4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DSHCT
MTR4_beta-barrel
DEAD
MTR4-like_stalk
DEXQc_Suv3
ResIII
Helicase_C
NPHP3_N
ATPase_2
nSTAND3
Death_3
Motif
Other DBs
NCBI-GeneID:
108727927
NCBI-ProteinID:
XP_018311736
LinkDB
All DBs
Position
Unknown
AA seq
1001 aa
AA seq
DB search
MANFSEDLFDVFDEHGDEIEILDIPKKIKPEVGVKRHSDADDDKANIKKLRHDSVLNDIN
LEEVACRITVHTVETVESCMHEIAIPPDQEYVPLEHQQGKPAKEYKFILDPFQKEAILCI
ENNQSVLVSAHTSAGKTVVAEYAIACSLKDKQRVIYTTPIKALSNQKYREFYEEFKDVGL
VTGDVTINPTASVLIMTTEILRNMLYRGSEVMREVGWVIFDEIHYMRDKERGVVWEETLI
LLPDNVHYVFLSATIPNARQFAEWVVHLHHQPCHVVSTDYRPTPLQHYIFPVGGDGIHLV
VDEMGQFKEENFNRAMACLQNMGDAAKGDTKGRKGGLRATNSGQTNIFKMVKMIMERNFA
PVIIFSFSKKDCEVYAMQMAKLDLNTLEEKKLVDEVFNNAVDVLNDEDKKLPQVTNLLPL
LRRGIGIHHGGLLPILKETVEILFGEGLIKALFATETFAMGLNMPARTVLFTAPRKFDGK
DFRWITSGEYIQMSGRAGRRGLDDKGIVILMIDEQVSPVVGKAIVQGKPDPINSAFHLTY
NMVLNLLRVEEINPEYMLERSFFQFQNQAGIPVLYNKVKELSTAYNTVNVDRYEEISSYH
DIREQLNRLSGEFQSFLTQPEYLVPFLQPGRLVKVKNEIETFDWGIIVNFKKKNPKNPVK
GKTVIVIDVLLYLSKNSKEGSPIPCRENEEGEMEVVPVLHNLISQISSLRLYYPKDXVLK
TIRXVKKRFPDGPPLLNPITDMHIEDQAFKDIVKKIEALEKRLYAHSLHKDPNVNVLYEQ
FLHKEELAAQLKQAKEEFKQAKSILQMDELKCRKRVLRRMAYCTSADVIELKGRVACELN
GADELLMTEMIFNGLFNALSVPQMVALISCFVCDEKSNEMPKSTEELSGPLRQMQDLARR
IAKVSTEANLELDEDAYVDRFKPYLMDVIYAWCKGATFLQICKMTDIFEGSIIRCMRRLE
EVLRQLCQAAKGIGNTDLENKFSEAIKLIKRDIVFAASLYL
NT seq
3006 nt
NT seq
+upstream
nt +downstream
nt
atggcgaattttagcgaagacttgtttgacgtttttgatgagcacggcgatgaaatagaa
atactggacattccgaagaaaatcaagccggaagtaggagtaaagcgacattctgacgcc
gatgatgacaaagcaaacataaaaaaattgcggcacgattctgttttgaatgatatcaat
ctagaggaagtggcatgtcgtataacagtgcatactgtagaaactgtagaatcttgtatg
cacgagattgctattcctcctgatcaagagtatgtacctttggagcatcaacagggcaag
ccagccaaagaatataaattcatactcgatccatttcaaaaggaagcaattttatgcatt
gaaaacaatcagtcagttcttgtctctgcacatacgtcggctggtaaaactgtcgtggct
gaatatgcaatagcatgttcgcttaaggataaacagagagtaatatatactactccaatt
aaagcgttgagtaatcagaaatatagagaattttacgaggaatttaaggatgttggttta
gtaaccggcgatgttactataaatccgacagcgagtgtattaatcatgactactgaaatt
ttgcgaaatatgctctataggggttcagaggtaatgcgtgaagttggttgggtaattttt
gatgagattcattatatgcgtgataaagagagaggcgtagtttgggaagaaacacttata
ttgctgccagacaatgtgcactatgtatttctttctgctactataccaaacgcacgacaa
ttcgcagaatgggtagtacatttgcatcatcaaccttgccatgtagtctctacggactat
aggcctacaccgttgcaacattatatatttccagttggcggcgacggtatacatctggtt
gtagatgaaatgggtcaatttaaagaagaaaattttaacagagccatggcgtgtctgcaa
aatatgggtgacgcagctaaaggtgacacaaaaggacgcaaaggtggtctacgtgccacg
aacagtggacaaacaaatattttcaagatggtaaaaatgatcatggagagaaacttcgcg
cccgtgataatctttagcttttcgaaaaaagattgcgaggtttacgcaatgcagatggct
aaactggatttgaatacgttagaagagaaaaaactagtagatgaggtttttaacaatgcg
gtagacgtcctcaacgatgaggacaaaaagttaccacaagttacaaatttgctgccactt
ttgcggcgtggaataggaatccaccatggtggactcttgccaatcttgaaggagacggtc
gagatattattcggcgaaggtttaatcaaagccctttttgccactgaaacattcgcgatg
ggcttgaatatgccggcacggacggtcttgttcacggcacctcgtaaattcgatggcaaa
gactttcgttggatcacgtcgggtgaatacatccagatgtccggtcgcgctggcaggaga
ggtctcgacgacaaagggattgtcatattgatgatagacgagcaagttagtcccgtcgtt
ggtaaagctatcgttcaaggaaagccagatccaatcaattccgcatttcatttgacttat
aatatggttcttaatcttctacgagtggaagagattaatcctgaatacatgttggaaaga
agcttttttcagtttcagaatcaagctggtattccagttttgtacaacaaggtaaaggaa
ttaagtaccgcttacaatactgtgaatgtagataggtacgaagagatttcttcgtatcat
gacatacgtgaacaactcaatcgactgagtggagagtttcaatcatttctaacgcaaccg
gagtatttagttccgtttttacaacctggaagattagtaaaagtaaaaaatgaaatcgaa
acgttcgattggggtatcatagtgaattttaagaaaaaaaatccaaaaaatccagtaaaa
ggcaagactgttattgtcattgatgttttactttatttatcgaaaaattctaaagaaggc
agtccaattccctgtcgcgaaaatgaagaaggcgaaatggaagtagttcctgttttacat
aatttaatttcacaaatcagttcactaagattatattatccaaaagatngtgtattgaag
acaatacgataagtgaaaaaaagattcccggacggtccaccgttacttaatcctattaca
gatatgcatatagaggatcaggcttttaaagatattgtaaaaaaaattgaagcgttagaa
aaaagattatatgcacattctttgcataaagatcccaacgtaaatgtattatatgaacaa
tttttgcacaaagaagaattggctgcgcaacttaagcaagccaaggaagaatttaagcag
gctaaatcgatacttcagatggacgaactcaaatgcagaaagagagttctaaggagaatg
gcatattgcacatcggcagacgttatagaattaaaaggacgtgtagcttgtgaactgaac
ggtgccgatgaactattaatgactgagatgatttttaatggtctttttaatgctttgagt
gtgccacagatggtggcattgatcagctgctttgtatgcgacgaaaaatcaaacgaaatg
cctaaaagtacagaggaattaagcggtccacttaggcagatgcaggatttggctcgcaga
atagcaaaggtatcaacagaagccaatctggaattagatgaggatgcatatgttgacaga
tttaagccgtatttaatggatgttatatacgcttggtgtaaaggcgcaacatttttacaa
atttgcaaaatgacagatatatttgaaggatctattatcaggtgtatgcggcgtttagaa
gaggtgcttcgacaattgtgccaagctgcaaaaggtattgggaatacagatctagaaaat
aaatttagcgaggcgatcaaacttataaaacgggatattgtgtttgctgcgtctttatat
ttataa
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