Mycetomoellerius zeteki: 108728148
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Entry
108728148 CDS
T11078
Symbol
Xpd
Name
(RefSeq) TFIIH basal transcription factor complex helicase XPD subunit
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03022
Basal transcription factors
mzt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
108728148 (Xpd)
09124 Replication and repair
03420 Nucleotide excision repair
108728148 (Xpd)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzt03021
]
108728148 (Xpd)
03036 Chromosome and associated proteins [BR:
mzt03036
]
108728148 (Xpd)
03400 DNA repair and recombination proteins [BR:
mzt03400
]
108728148 (Xpd)
Enzymes [BR:
mzt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
108728148 (Xpd)
Transcription machinery [BR:
mzt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
108728148 (Xpd)
Chromosome and associated proteins [BR:
mzt03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
108728148 (Xpd)
DNA repair and recombination proteins [BR:
mzt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
108728148 (Xpd)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HBB
DEAD_2
Helicase_C_2
DEAD
ResIII
AAA_11
nSTAND3
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
108728148
NCBI-ProteinID:
XP_018312057
LinkDB
All DBs
Position
Unknown
AA seq
759 aa
AA seq
DB search
MKISVDGLIVYFPYDYIYPEQYAYMLELKRGLDAKGHCLLEMPSGTGKTITLLSLIVAYM
LEHPLDVTKLIYCSRTVPEIEKVIEELKKLMDYYEEETKSKPKIVGLVLSSRKNMCIHPE
VSREREGKIVDGRCHSLTASYVRERHNYDESTPICNFYEGFDMEGKEQIMPPGIYSIDDL
KEYGKDRNWCPYFLARFTILHAQIVVYSYHYLLDPKIAETVSKELSRSSVVIFDEAHNID
NVCIDSMSVKINRKTMEKSTANIQLLEKTVAEMRQEDVNKLKEEYDRLVEGLKDAQFQRE
TDVILANPILPNEILEEVVPGNIRNAEHFVSFLKRFVEYLKTRLRVQHVMQESPAAFLKD
IQAKVAIERKPLRFCAQRLASLLRTMEITDLTDFSPIILVTHLATLVSTYTHGFTIIVEP
FDDKTPTVLNPILHFSCLDSSIAMKPIFDRFQSVVITSGTLSPLDMYPKVLNFHPVIMSS
FTMTLARPCLLPMIVAKGNDQVAISSKYETREDVAVIRNYGQLLVEFAATVPDGLVCFFT
SYLYMESVVAAWYDQGVVDQLQRHKLLFIETQDSAETSLALINYIKACENGRGAVLLSVA
RGKVSEGVDFDHHLGRAVLMFGIPYVYTQSRILKARLEYLRDQFQIRENDFLTFDAMRHA
AQCVGRAIRGKTDYGIMVFADKRFSRIDKRSKLPKWIQEHLNDSLCNLSTEEAIQISKRW
LRQMAQPFTRENQLGLSLLTREQLEKEEAAKIEQKAQQN
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaagataagcgttgacggattgatcgtatatttcccatatgattatatttatccagaa
cagtatgcatacatgctcgaactcaagcgtggcctggatgccaagggacattgtttgttg
gagatgccttcaggcactggcaaaacaataactttattgtcactcattgtagcatatatg
ctggagcatccattagacgtaacaaagttgatttattgttcccggacagtgccagagata
gagaaagttatagaggagctgaagaagcttatggattattatgaggaagaaaccaaaagc
aagccaaaaattgtcggtctagttcttagctcacgtaaaaatatgtgtattcatcctgag
gtcagtagagaacgagagggtaaaatagtagatggacgttgtcattctcttactgcatcg
tatgtacgagagagacataattatgacgaatctactccgatttgtaatttttacgaagga
tttgatatggagggcaaggaacaaattatgcctcctggtatttactccatcgatgattta
aaagaatacggaaaagatcgtaattggtgtccgtacttccttgcaagatttacaatcttg
catgcacagattgtagtgtacagttatcattatttattggatccaaagatcgctgagact
gtatccaaagagttaagcaggagttcagtagttatctttgatgaggctcataatattgat
aatgtctgcattgattctatgagtgtaaagataaacagaaagacaatggagaaaagtaca
gctaacatacaactcttagagaaaactgtggcagaaatgagacaagaggatgtaaataaa
ttgaaggaagagtacgacagattggtcgaaggtctaaaggatgctcaattccagagagaa
actgatgtcatcttagccaaccctattttaccgaatgaaatacttgaagaagtcgttccc
ggtaacataagaaatgcggagcattttgttagctttttgaaacgattcgtcgaatattta
aaaactcgcttacgcgttcaacacgttatgcaagaatcaccagcagcatttcttaaggat
atccaagcgaaggtcgctattgaacgaaaaccgttgcgattttgcgcgcaaagattagca
tccctcttacgtactatggagataacagatctaacagatttctctccgataatcctagtg
acgcatcttgcgacattagtctccacatacacgcacggcttcacaattatagtggaacca
ttcgacgataaaacgccaacagtattgaatccaattttacattttagctgtctagattct
tccattgctatgaaacccatattcgatagattccagtccgtggtaatcacttccgggacg
ttgtccccattggatatgtatcccaaagttttaaactttcatccagttataatgtcatcg
tttacaatgacattggctagaccatgtcttttacctatgatcgttgctaaaggtaacgat
caagttgccatttcgtcgaaatacgaaacacgagaggatgtggctgttataagaaattat
ggtcaattgttagtcgaatttgctgcaacagtgcccgacggcttagtttgcttttttacg
tcatatttatatatggaatccgtagtagccgcatggtatgatcaaggagttgtggatcaa
cttcagaggcataaattattgttcatcgaaactcaggattcggcggaaaccagtctagct
ctgatcaattacataaaggcttgtgagaacggtagaggagctgttctactctcggtggct
cgtggaaaggtgtctgaaggcgtcgactttgatcatcatttgggcagagccgtgctgatg
tttggtataccttatgtgtacacacagtcacgtatcttgaaggcgcgtttggaatatctc
agagatcagtttcagattcgagaaaacgatttcttaacttttgatgccatgagacacgcc
gcacaatgcgtaggacgtgcgatcagagggaaaacagattatggtatcatggtgtttgca
gataagagattttcaagaatagataaacgaagcaaattaccaaaatggatacaggaacat
ttgaatgatagcttatgcaacttatcaactgaagaagctatacagatcagtaaaagatgg
ttacgacaaatggcacagccattcacgcgtgagaaccaacttggattgtcattattgacg
agagaacaacttgagaaagaagaggctgccaagatcgaacaaaaggctcagcaaaattga
DBGET
integrated database retrieval system
