Mycetomoellerius zeteki: 108728708
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Entry
108728708 CDS
T11078
Symbol
Sym
Name
(RefSeq) symplekin
KO
K06100
symplekin
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
108728708 (Sym)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzt03021
]
108728708 (Sym)
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108728708 (Sym)
Transcription machinery [BR:
mzt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
108728708 (Sym)
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
108728708 (Sym)
U7-dependent histone pre-mRNA processing factors
108728708 (Sym)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
Atrophin-1
SecD-TM1
Motif
Other DBs
NCBI-GeneID:
108728708
NCBI-ProteinID:
XP_018312939
LinkDB
All DBs
Position
Unknown
AA seq
1106 aa
AA seq
DB search
MDPRLHRRSEAEKGPSDLIVEWLNEASISLVEEIKVTNICKVQELLLNKEPHLLERYLND
ILQFSVDRSSEVRKTITGFIEESGIKYPEVIPRTVQILLRLASDETSVVAKRALRASGRI
LRAALKWIASAAVVTTDMELAWTQLSALKVQIINMIDSDNDGIRTQAVKFLEGVILIQTY
PDPDSPKKPDDFSLEDIPLTLKIARRRKLEEEANHVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKMRPQFMSNVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPASIEFAS
TIAKQLTQLGAKEQEIIKAYPKPEDVRRMKKRQQEIAATAAKRVKVEVIIDEAEATSVPA
PKLPDLIELSESFIAERLSVEIATDLVMDSMAWVPDTMTTIFQREYQPTATTDINIQRQT
IAKLLAIQIKQTKAKKNKRDKEEDAVMEDLIKNPTISVAEAKRERKREKDREKEKEAKAS
LEAHEKSLAKARNRTKALKLVEVTKPLPKEIKERMLLMAVNRILLSEKTAVFGGVATVRS
KILTTLAATFNPYIKEAVLRYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLCTKPQEA
PHQAYNFLLCTLVSAIDLIQGKDRDALLSRLYLEAPLITEDAVEALKMVSSDETRGLAPL
QLLKEMVVRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRAELSKLIEEYAVLY
LGFLRLHNPPEIVFGQDRGRPQIESLWSESTTRACLGLYLALLSEHQDLIHELARVYTSM
GADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGSETLVTRIIHILTEKSAPSAELVA
RVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTHNNDSGV
PHTSPITPAELLIALHSIDPSKAELKTVIKATSLCFAEKQAYTQETVAVVMQHLMEMTPL
PTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQSFAVIL
QLPPAQLAEALRMANNLRAPLLAHVEAFAENQKAHIPQSIMDVIQGKVPCDMLDEFDIAP
RGDYSNDQKPDTMEIDLSEPAPPGLD
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggatccacgtttgcatagaagatccgaagctgaaaagggaccgagcgatttgatcgtt
gagtggttaaatgaggcttccataagcctcgttgaagaaattaaagtcacaaacatatgt
aaagtacaggaacttttgttgaataaggaaccacatctgttagagcgttatttaaatgac
attctacaattctctgtagatagaagctctgaagttagaaagaccattacaggatttatc
gaagaatctggaataaaatatccagaggtaattcctcgtacagttcaaatacttcttaga
ttagcgtctgatgaaacatcggttgtagctaaacgtgctcttagagccagtggtagaatt
ctcagagctgctcttaagtggatcgctagtgctgctgttgttacgacagatatggaatta
gcatggacacagctaagtgctcttaaagttcaaattattaatatgattgacagtgacaat
gatggaataagaacacaagctgtaaagtttcttgaaggcgttattttaatacagacatat
ccagatcctgacagtccaaagaagcctgacgatttctctcttgaggatattccgctaaca
ttgaaaatagctcgtagacgaaaattggaggaagaagcaaatcacgttatggatttattg
attaagtttcatggatctccacatgttagcagcgtcaatttaatgacatgtatgggatct
ttggcgttaattgccaaaatgaggccgcagtttatgtcaaatgtaattcaagcgttacaa
aggttgcaacatgatctaccaccaacactgtctgattctcaagtaaccagtgtacagaag
caattaaaactcacgcttcttggactaatgaaacaccctgctagtatagagtttgcttca
actattgctaaacagttgactcaacttggagcgaaagagcaggaaattattaaagcttat
ccaaaaccagaagatgtccgtcgaatgaaaaaacgtcaacaggagatagctgctactgct
gcgaaacgagtaaaagttgaagtgataatagatgaagcagaagctacttctgttcctgcg
cctaaattaccagacttaattgaactttccgaaagttttattgcagagagactcagtgta
gaaattgcaacggatttggtgatggatagtatggcatgggttccggatactatgactaca
atttttcaaagggaatatcaacccacagcaactactgatattaatatacaacgtcaaaca
attgctaaacttctagcaatacaaattaaacagactaaagcaaaaaagaataaaagagat
aaggaagaagatgccgtaatggaagacttaattaaaaatcctacaattagcgtagccgag
gcaaagagggagcgtaaacgtgaaaaagatcgggaaaaagagaaagaagcgaaagcgtca
ttagaagctcatgagaaatctcttgcaaaagccagaaatcgtacgaaggcgttgaaatta
gtcgaagtgacaaaaccacttccgaaggaaattaaagaacgaatgttactgatggcagtc
aataggatattactttcagaaaagactgcagtttttggtggtgtagctactgtaagatcc
aagattctgactacactagcagccactttcaatccttacattaaagaagctgttttacgt
tatattactgatgacatgcgaaatcgattagatttagcattaggttggctatatgaagaa
tatgcattgctacaaggatttcaaaggcggactacattatgtacaaaaccacaagaagct
ccacatcaggcatataattttttattgtgcactttggtttcagctattgatttgattcag
ggtaaagatcgtgatgctttgttatccaggctttatttggaagcaccattaataacagaa
gatgctgtagaggctttaaaaatggtatcatctgacgaaactagaggtcttgcaccattg
cagcttctgaaagaaatggtagtgcgtagaccaaccaaacaattggtatttttaaatgtc
ttattgtgccatactggacatgaaaacaatacaatacgagaagctgcaatacaattagtt
tgtcagttatacagccgagcagagttaagcaaactgatcgaggaatacgcagtattatat
ttaggctttttacgccttcataatccaccggagattgttttcggacaagatagaggcaga
ccgcaaatcgagagtctgtggtccgaatcaactacacgtgcctgcttaggattgtatctt
gctcttctcagtgaacatcaagatctgattcatgaattagctagggtatatacgtcaatg
ggagcagatgtgaaacgtattgtattaagactagtagaagggccagtgagatctttaggt
atgggtagtccacaactcctcgcacttgttgaaaactgtccaaaagggtctgaaacgtta
gtcacaaggatcatacatattcttacagaaaagtctgccccaagcgcagaattagtagcc
agagtacgcgagttatatcaaactagagtttccgatgtcagatttttaatacctgtcctg
aatggacttacaaagaaagaagtaatcgccgcattaccaaaattaatcaaattaaatcct
attgttgtaaaagaggtgtttaataggttactcgggacacataataatgacagtggagtt
cctcatacatcgcctattacgcctgcggaattattgatagctctacatagtatagatcca
agcaaggctgaattaaaaaccgtcattaaggcaacgtctctttgttttgctgagaaacaa
gcgtacacgcaggaaacggtcgccgttgtgatgcaacatcttatggaaatgacaccttta
ccaacattattaatgcgtacagtcatacaaagcttggccctttatcccagattaagtgga
tttgttatgaacatacttcaacgactgattctgaagcaagtgtggaaacagccgaaagtg
tgggaaggttttgtgaaatgttgcgaacgcacgcagccacaaagtttcgccgttatttta
caattaccaccggcgcagttagcagaggctcttcggatggcaaacaatttacgtgctcct
ttgctggcccacgttgaagcttttgctgagaatcaaaaagcacacattccgcaatcaata
atggatgtcatacagggtaaagtgccctgtgacatgctcgatgagtttgatattgcacca
cgtggtgattattcgaatgatcaaaaaccagatacaatggaaattgatctttcggaacca
gcccctcccggtttagattag
DBGET
integrated database retrieval system
