Mycetomoellerius zeteki: 108728802
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Entry
108728802 CDS
T11078
Name
(RefSeq) ATP-dependent RNA helicase DDX42
KO
K12835
ATP-dependent RNA helicase DDX42 [EC:
5.6.2.7
]
Organism
mzt
Mycetomoellerius zeteki
Pathway
mzt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108728802
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mzt03041
]
108728802
Enzymes [BR:
mzt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108728802
Spliceosome [BR:
mzt03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
108728802
Complex B
108728802
Complex C
U2 SnRNP specific factors
108728802
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
MscL
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
108728802
NCBI-ProteinID:
XP_018313089
LinkDB
All DBs
Position
Unknown
AA seq
768 aa
AA seq
DB search
MSYHRGSGNKPKGFGFSGFQMSGTKRSGTNIPPPPPNSTLSKQGYHTMNAITENALSACW
GMPKKRSKTEEEYFEDDDEPPTSSLEYIPAPGSPTYDLMKKSATKDNSDSEEDTLDAFMA
GIDAEVKQNTYAAQCGDNRKEDKSKGFRADIDGEDDEESYYRYMEENPTAGLQQEESDQE
IEYDEDGNPIAPPKKKEIDPLPSIDHSEIEYESFEKNFYNVHEEIASLSKQQVDDLKKTL
GIKVSGPSPSNPVTSFGHFGFDDALIKAIRKNEYTQPTPIQAQAIPAALSGRDIIGIAKT
GSGKTAAFIWPMLVHIMDQRELKAGDGPIGLILAPTRELSQQIYQEAKKFGKVYNIQVCC
CYGGGSKWEQSKALESGAEIVVATPGRMIDLVKMKATSLTRVTFLVLDEADRMFDMGFEP
QVRSICNHVRPDRQTLLFSATFKKKVEKLARDVLTDPIRIVQGDVGEANTDVTQHVIMFH
NNPSGKWNWLLQNLVEFLSAGSLLIFVTKKLNAEELANNLKLKEFEVLLLHGDMDQIERN
KVITAFKKKEVSTLVATDVAARGLDIPHIKTVVNYDVARDIDTHTHRIGRTGRAGEKGTA
HTLVTEKDKEFAGHLVRNLEGANQEVPKSLMDLAMQSAWFRKSRFKGGKGKSLNVGGAGL
GFRGRPNSSNSGGSTSQASKDISEVVKKLERHGPGSDRLSAMKAAFRSQYNSQFRASSDH
TWEQTITPPSVIMPPPPPVPPPKPATEDNQASNSSGPERKRVRKSRWE
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcatcgaggaagtggtaacaagccgaaaggctttggcttcagtggcttccaa
atgtctggaacaaaaagaagtggtaccaatatacctccacctccaccaaactctaccctg
agcaaacaaggctatcacacgatgaatgccattacggaaaacgccttgtctgcgtgttgg
ggcatgcctaaaaagcgcagcaagaccgaggaagaatactttgaagacgatgacgaacct
ccaacttcatcgttggaatatataccagcgcctggttctcccacatacgacttgatgaaa
aaatcggcaacgaaggataacagcgacagtgaggaggatactctagatgctttcatggca
ggtattgatgcagaagtgaagcagaatacttacgcagctcagtgtggtgataatcgtaaa
gaagataaatctaaaggatttcgggcagatattgatggagaagacgatgaggaaagttac
tacagatatatggaagaaaatccaactgctggtttgcaacaagaagaatccgatcaagag
attgaatacgatgaagacggcaatcccattgcaccaccaaagaagaaggagatcgatcca
ttaccttcaattgatcatagtgaaatagaatatgaatcgttcgagaagaacttttacaat
gtgcatgaagaaattgcaagtttaagcaaacagcaggtcgatgatttaaaaaagactctg
ggtataaaagtatccggaccgtctccgtcaaatccggtaacgagtttcggtcatttcggc
tttgatgatgctttgattaaagctatccgtaaaaacgagtacacacagcccacacctatt
caggcgcaggcgattcctgctgctttaagcggacgggatataataggtatagcaaaaact
ggtagcggtaaaacagcggcatttatttggccgatgttagtgcatattatggatcagcgc
gaattgaaagctggagatggcccgattggtctgattttggcaccaacgagagaattgtct
caacagatttatcaagaagcaaagaaatttggaaaggtttacaatattcaagtatgttgc
tgctatggaggtggcagcaaatgggaacagagcaaagcattagaaagcggcgcagagatt
gtagtcgctacccctggtagaatgatcgatctagttaaaatgaaagcaacgagtttaact
agagttacatttttagttctggatgaagctgatagaatgttcgacatgggatttgaaccg
caagtacgatctatatgtaatcatgtgagacctgacagacaaacattactgtttagcgca
acattcaaaaagaaagtggaaaagctcgctagagatgttttaacagatcccattaggata
gtgcaaggagatgttggcgaagctaataccgacgtaacgcaacatgttatcatgttccat
aataatcctagtggtaaatggaactggctgttacagaacttggttgaatttctaagtgct
ggcagtcttttgatctttgtcactaagaagctgaacgcggaagaacttgccaacaatctc
aaattgaaagaatttgaagtattgcttttgcatggtgatatggatcagattgagagaaat
aaagtgattacggcttttaagaagaaggaagtcagtaccttggtcgctactgatgtagca
gcgcgaggcttggacattccacatatcaagactgtcgtaaattacgacgtagcgcgagat
atcgacacacatacacacagaataggaagaacaggacgagccggtgaaaaaggtacggca
catactcttgtgacggaaaaagataaggagtttgctggacatttagtgagaaatttggag
ggagcaaatcaggaagtgccaaagagcttgatggatctggctatgcaaagcgcatggttc
agaaaatcaaggtttaaaggtggaaaaggaaagagtttaaatgttggtggagcaggactt
ggtttcagaggcagacccaattcatcgaattcgggtggatcgacatcacaggcatccaag
gatatcagcgaagtagttaaaaaattagaaagacatggacctggtagtgacagactctct
gctatgaaagctgcttttcgaagtcaatataattcccagttccgagcatcatcagatcat
acctgggaacagacgatcactccaccttccgtgataatgccgcctccaccacccgttcca
ccaccgaaacctgcaaccgaagataaccaagcttccaattcctcaggaccggaacgtaaa
agagtgcgaaaaagtcgatgggaatga
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