Mycetomoellerius zeteki: 108729065
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Entry
108729065 CDS
T11078
Name
(RefSeq) transcription elongation factor SPT5-like isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
mzt Mycetomoellerius zeteki
Pathway
mzt03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mzt00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
108729065
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzt03021
]
108729065
03019 Messenger RNA biogenesis [BR:
mzt03019
]
108729065
Transcription machinery [BR:
mzt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
108729065
RNA polymerase I system
108729065
Messenger RNA biogenesis [BR:
mzt03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
108729065
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW4_SPT5
Spt5-NGN
KOW
KOW6_SPT5
KOW7_SPT5
KOW5_SPT5
KOW2_Spt5
KOWx_SPT5
Spt5_N
CTD
KOW1_SPT5
GPKOW_C
CDC45
DUF5847
Motif
Other DBs
NCBI-GeneID:
108729065
NCBI-ProteinID:
XP_018313485
LinkDB
All DBs
Position
Unknown
AA seq
1135 aa
AA seq
DB search
MSNSQGTFDAARRSRSRSSSRSFESKNSSRSRARFTSSTSLPSTKIKFTKKKADVSSEEE
DQPCYTSEFVKSLESEEESEGEDNISENEEEQEEVEQKEEEEEEEEDDDDEEEDEDEEED
ENEEEAEEDKDEEDNDDMPRKKKKSRIASFIIDEAEVDDDVEDDDEWEEGAHEIGIVGNE
VDELGPTAREIERRRRDTNFWDTQEEEIEEYLRKRYSNKSTAVHRFGDGGEEMSEEIIQQ
TLLPGVKDPNLWMVKCRIGEEKATVLLLMRKFIAYQNSNDRLQIKSVFAPEGVKGYIYIE
AYKQSHVKAAIENVGSLRMGTWKQQMVPIKEMTEVLRVIKKQTRLKPKQWVRLKRGIYKD
DLAQIDYIDLAQNQIHLKLLPRLDYTRFRGALRTVQNESDILKRKKNRQPIKPFDPEAVR
AIGGEVTKNGDFHIFEGNRYSHKGFLYKNFSLNNIIAEGVKPTLSELERFEEVPQDIEID
FNDTPGIGIFGKKDQSHCLSNGDNVAVCEGELINLQGKIISIDGNTIMVMPKHEELNEVL
EFQASELRKHFAQGDHVKIIAGRYEGDTGLIVRVEQNRIVLFSDLTMHELEVLPRDLQLC
SDMATGVDTLGKYQWGDLVQLDAQTVGVIIRLERENFHVLSIHGKVVEARPQSLTKRHEN
RNTIALDSQQNTIQRKDIVKVVDGPHAGRGGEIKHLYRSFAFLHSKIFIDNGGIFVCKTR
HLQLSGGNKATPISIPLLVGFMSPKITSPMHPSGGSFGQNSGDRRGRSGVDGIRRDRELI
GTTVKITGGPYKGNVGIVKDATQTTARVELHSTCHTISVDRSHIATVGVSTRDGGFSSYN
RTPIYGSGGQTPTYSKDASKTPMHGFQTPIYECGSRTPHYGSMTPSHDGSRTPGQSGAWD
PTITNTPARTNDFDQYNTEEGGSPGYPPQYAPTEGPFIPQTPSIMYGSEQSFGSCHSSPI
ESSTSNSSSNHESYIATPSSMNTEYINKSYDAYSTPSPRGYTPSSPYNPITPSSGMDADD
DSDWHTTDIEVRICDTHDDPALVGQQGVIRQVSGGMCTVYLPTEDRVVSIVGGQLEFVVP
SRGDRVKVILGEEDREAVGTLLSIDNQEGVVKLTTDEIKFFQFRFLGKMGEIKQG
NT seq
3408 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaattcgcaaggtacattcgatgcggcaagaagatctcgaagtaggagttcctca
cgaagctttgaatccaagaattcatctagatctcgagcacgttttacaagttccacttca
ttgcctagcacaaaaattaaattcacaaaaaagaaagcagatgtcagctcagaagaagaa
gaccaaccatgttacacatcagaatttgtgaaatccctggaatcagaagaagaatctgaa
ggagaagacaatatcagtgaaaatgaggaagagcaagaagaagttgaacaaaaagaagaa
gaagaagaagaagaagaagatgatgatgatgaagaagaagatgaagacgaagaagaagat
gaaaacgaagaagaagctgaagaagataaagacgaagaagataatgatgatatgccgaga
aagaaaaagaaaagtagaattgctagcttcatcatagatgaagctgaagtagacgatgat
gtggaggatgatgatgaatgggaggaaggtgcgcatgaaattggtatcgtgggaaatgag
gtggacgaattaggaccgactgcgcgtgagattgagagacgacgtagagatacaaatttt
tgggatacgcaagaagaggaaattgaagagtaccttcggaaaagatatagcaacaaatcg
acagccgttcatcgttttggcgacggcggcgaagaaatgagcgaggaaatcattcagcaa
actttattaccaggcgtgaaagatccaaatttgtggatggtaaaatgtcgaataggagaa
gaaaaagctacagtactgttattgatgcgcaagtttatcgcataccagaattcaaatgac
cgtcttcaaataaaatctgtttttgcaccggaaggagttaagggatatatatacatagag
gcttacaagcagtcgcatgtaaaagctgctattgaaaatgttggaagtctcagaatgggt
acatggaagcaacaaatggtgcctattaaagagatgacagaagtgctgcgagtaattaaa
aaacagactcgtttaaaacctaagcaatgggtccgtctgaaacgaggcatttataaagat
gatttagctcagattgattatatcgatttagcacaaaatcaaattcacttgaaattgctt
ccaagactcgattacactagatttcgtggcgcgttgagaacagtgcagaacgaatccgat
atattgaaacgcaagaagaacaggcaaccgataaaaccatttgatcctgaagcagttcgt
gctattggaggagaagttactaaaaacggagatttccatatttttgaaggaaatagatat
agtcataaaggatttctttacaaaaatttttccctaaataacattatcgcagagggtgtt
aagcctacactttccgaattagaaagatttgaagaagtgccacaagatattgaaatagat
tttaatgatacgccaggaattggaatatttggaaaaaaagatcaatctcattgcttgagt
aatggagacaatgtagcagtatgcgagggtgaacttataaatctacagggaaaaatcatt
tccatagatgggaacacaattatggttatgccgaaacatgaagaacttaatgaagttttg
gaatttcaagcttcagaattacgaaaacattttgcgcaaggcgaccacgtgaagattata
gcaggacgatacgaaggcgacacaggtttaattgttagagtagaacaaaatagaatagtt
ttattctccgatttaacaatgcatgaactcgaggttctaccgagggatttgcaattatgt
tctgacatggcaactggtgtcgacacattaggtaaatatcagtggggtgacttggtgcag
ctagatgcacaaacagttggtgttatcattcgattggaacgtgagaattttcatgtcttg
tctatacatgggaaagtagtcgaagcaagaccgcaaagtcttacgaagcgtcacgaaaac
agaaatacgatcgcattggactcccaacagaacactatacaaagaaaggatatcgttaag
gtagttgatggaccgcatgccggtcgaggaggtgaaattaagcatctttacagaagtttt
gcttttttgcactcgaaaatattcatcgataacggtggaatatttgtatgcaagaccaga
catttacaactatccggtggaaataaagcaactcctatctctataccactattggtagga
tttatgtcacctaaaattacgtccccgatgcatcccagcggaggtagttttggacaaaac
agcggagatagacgaggtcgtagtggtgttgatggtataagacgtgatcgagaattaata
ggaaccaccgtcaaaataacaggtggaccttataaaggaaacgtgggtattgtaaaagat
gcgacgcagacaacagcacgagtggaactacattcaacgtgccacaccatctcggttgat
cgttctcatatagcaaccgttggtgtttcaacaagagatggtggtttcagcagctacaac
agaactccgatttatggatccggtggacagacgcctacatattcgaaggacgcatcaaaa
acacctatgcatggtttccagacgcctatatacgaatgtggttctcgtactccacattac
ggttcaatgacaccatctcacgatggctcacgaacaccaggtcagtctggagcctgggat
ccgacaattactaacacacctgctaggacaaacgatttcgatcaatataacacagaggag
ggtggctcacctggttatcctccccaatatgctcctactgaagggccgtttattccacag
actccgagcattatgtacggttcggaacaaagcttcggttcatgtcattcgagtcctata
gaaagttctacatcaaattctagctcaaatcatgaaagctacattgctactccgtcctca
atgaatactgaatacatcaacaaatcatacgacgcgtattcgacgccttctccaagaggt
tacacacctagtagtccatataatccaataacacctagttcaggaatggatgcagatgac
gattcagattggcatacaacggatattgaagttcgcatttgcgacacccatgatgatcct
gcccttgttggacaacaaggagtcatccgacaagtttcaggtggtatgtgcaccgtttat
ctacctacggaagatcgagtagtaagcatagtgggtggacaattagaatttgtagtaccg
tcacgtggcgatcgagtcaaagtgattcttggtgaagaagaccgtgaagccgtcggcact
ttactttcaatcgacaatcaagagggagtggtaaagcttactacggacgagataaaattc
ttccaatttcggtttttgggtaaaatgggagagataaaacaaggatag
DBGET
integrated database retrieval system
