Marinicella algicola: PN837_008900
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Entry
PN837_008900 CDS
T11628
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mzw Marinicella algicola
Pathway
mzw03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mzw00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PN837_008900 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mzw03021
]
PN837_008900 (rho)
03019 Messenger RNA biogenesis [BR:
mzw03019
]
PN837_008900 (rho)
Transcription machinery [BR:
mzw03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
PN837_008900 (rho)
Messenger RNA biogenesis [BR:
mzw03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
PN837_008900 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
Spore_III_AA
S1CSD-TOTE-2
DUF4047
Motif
Other DBs
NCBI-ProteinID:
XJJ42986
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All DBs
Position
2185121..2186377
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AA seq
418 aa
AA seq
DB search
MNLSELKKMSSTQLTALAAEAGVENRTRVNKQQVIFSLLKKHAKNGEDIFGDGVLEVLPD
GFGFLRAPEGSYQAGPDDIYVSPSQIRRFGLRTGDTIVGKIRPPKDSERYFALLQIQTIN
YEPPENTKGKIVFENLTPLFPTEQLKMERGDGSREDLTTRIIDLISPIGKGQRGLIVSPP
KAGKTMILQNIATSIAENNPEAILFVLLIDERPEEVTEMARTVRGEVIASTFDEPATRHV
QVADMVIERAKRLVEHKRDVIILLDSITRLARAYNTVTPASGKILTGGVDANALHRPKKF
FGAARNVEEGGSLTILATGLIETGSKMDEVIFEEFKGTGNMEVHLDRRAAEKRIWPALNI
NKSGTRREELLVDNEFLQKAWILRKILNPMEELQAIEFLLDKLKDTKTNQEFFTSMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaacttatctgaactaaaaaaaatgtcatcaacccagttaacagcacttgctgctgaa
gcgggtgttgaaaacagaacacgtgttaacaaacaacaagtaattttttctcttttgaaa
aaacacgctaaaaatggcgaagatatcttcggcgatggcgtattggaagtactgccagat
ggctttgggtttttacgtgctccggaaggttcctatcaggcaggtcctgacgatatttat
gtctcacctagccaaatcagacgctttggtctgcgcaccggcgataccatcgttggaaaa
atcagaccaccgaaggactcggaaagatattttgcactgttacaaatccaaaccattaat
tacgagccgcctgaaaacaccaaaggcaaaatcgtttttgaaaacctgacaccactgttt
ccaacagaacaactgaaaatggaacgtggagacggctccagagaggatctgaccacccgt
atcattgatctgatatcacctatcggtaaaggccaacgtggtttgattgtatctccaccg
aaagccggtaaaaccatgatactgcaaaacatcgccacttcgattgcagaaaacaatcca
gaagccattctctttgtattgctgattgatgagcgccccgaagaagtaactgagatggcc
agaactgttcgcggcgaagtcatcgcttctacttttgatgagccggctacacgccacgta
caggttgccgacatggtgattgaacgtgccaaacggttggttgaacacaaacgcgacgtg
attattctgctggactctattacacgtctggcacgtgcttacaatacggttacacctgct
tccggtaaaatcttgactggtggtgtggatgccaacgctttgcacagaccgaaaaaattc
tttggtgctgcgcgtaatgtcgaagaaggcggcagtttaaccatcctggcaaccggtttg
attgaaactggctcgaaaatggatgaagttatttttgaggaatttaaaggcactggtaac
atggaagtgcatttggatcgccgcgctgcagaaaaacgcatctggccagcactcaatatc
aacaaatccggtacccgccgcgaagagttattggtggataacgaatttctacaaaaagcc
tggattctacgtaagattcttaatcctatggaagaactgcaagccattgaattcttgttg
gacaaactaaaagatactaaaaccaaccaggaattctttacctcaatgaaacgttaa
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