KEGG   Candidatus Nanopusillus acidilobi: Nps_02275
Entry
Nps_02275         CDS       T04255                                 
Name
(GenBank) hypothetical protein
  KO
K03136  transcription initiation factor TFIIE subunit alpha
Organism
naa  Candidatus Nanopusillus acidilobi
Pathway
naa03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:naa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Nps_02275
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:naa03021]
    Nps_02275
Transcription machinery [BR:naa03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIE
     Nps_02275
 Prokaryotic type
  Archaeal type
    TFE
     Nps_02275
SSDB
Motif
Pfam: Zn_Ribbon_TF TFIIE_alpha DUF8617 Zn_ribbon_RPAB4 DUF325 HypA DUF4423 WHD_RecQ_mid_bact HTH_69 DUF7564 WHD_POLR3C HTH_34 DZR DUF8612 DUF3179 Zn_ribbon_GRF_2 ADK_lid z-alpha Rpr2
Other DBs
NCBI-ProteinID: AMD29880
LinkDB
Position
398694..399209
AA seq 171 aa
MSYLLNENYLKILEYIADKKEFTEREIKRQLKIKEEEIRKLLYILEENNIVYPISIINNN
GKFDFKWGNKVPDKEKLFSLLINKEINRINEEIKNTPKTLYYCTECGSAYTFDDAYENDF
ICKECGSLLVEKENFRIIELENIVHNLQLLLDKYSSKATKKEKASKARSKK
NT seq 516 nt   +upstreamnt  +downstreamnt
atgagctacctacttaacgaaaactatttaaaaatattagaatatatagcagataaaaag
gaatttacagaaagagaaataaagagacaattaaagataaaggaagaagaaattaggaaa
ttattatatatattggaagaaaataatatagtatatccaataagcataataaataataat
ggaaaatttgatttcaaatggggaaataaagtaccagataaagaaaaattatttagccta
ttaattaataaagaaattaatagaattaatgaagaaattaaaaatactccaaaaacatta
tactattgtactgaatgtggaagtgcatataccttcgacgatgcatatgaaaatgatttc
atatgtaaagaatgcggatcattattagttgaaaaggaaaatttcagaataatagaatta
gaaaacattgtacataacttacaattattactagataaatattcttcaaaagctacaaag
aaagaaaaagcatcaaaagcaaggagtaaaaaataa

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