Candidatus Nanopusillus acidilobi: Nps_02390
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Entry
Nps_02390 CDS
T04255
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
naa
Candidatus Nanopusillus acidilobi
Pathway
naa03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
naa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nps_02390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
naa03400
]
Nps_02390
Enzymes [BR:
naa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
Nps_02390
DNA repair and recombination proteins [BR:
naa03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
Nps_02390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMD29902
LinkDB
All DBs
Position
416432..417181
Genome browser
AA seq
249 aa
AA seq
DB search
MKIISWNVNGLKSIIQKGLIDFIKKYNADFYLFQEIKTKEIPLTFQLLGYNVYSFPAKKS
GYSGVLTLTKIKPNNLKYGIGIEKFDIEGRVITMEYDKFYLINVYFPNAGVGTLKRLDFK
LEFDKEFEKYVLSLNKPCIVCGDFNVAHKDIDIYDPINLKGYAGFTDEERQWFDHFLSLG
FIDTFRYIKGNIRKYSWFSYSIIARKKNEGWRLDYCVVSKELKDKIVNADILVDIFGSDH
VPILLEINI
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattatatcatggaatgttaatggattaaaatcaataattcagaaaggtttaatt
gattttattaaaaaatataatgcagatttttatctatttcaagaaataaaaacaaaagaa
ataccattaacttttcaattacttggatataatgtatattcattccctgcaaagaaaagt
ggatacagtggagtattaacattaacaaaaataaaaccaaataatttaaaatatggaatt
ggaattgaaaaatttgatattgaaggaagggttataacgatggaatatgataaattttat
ttaataaatgtatattttccaaatgctggagttggaacattaaaaagattggattttaaa
ttggaatttgataaagaatttgaaaaatatgttttatctttaaataaaccatgtatagtt
tgcggagattttaatgtagcgcacaaggatattgatatatatgatccaataaatttgaaa
ggttatgcaggatttacagatgaggaaagacaatggtttgatcattttttatctttagga
tttattgatacatttagatatataaaaggaaatataagaaaatatagctggttttcatat
tcaattattgcaagaaagaaaaatgaaggatggagacttgactattgtgtagtaagtaaa
gaattaaaagacaaaatagttaatgcagatatactagtagatatatttggatctgatcat
gttccaatattattggaaataaatatataa
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