Candidatus Nanopelagicus abundans: B1sIIB91_00025
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Entry
B1sIIB91_00025 CDS
T05091
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
nab
Candidatus Nanopelagicus abundans
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nab03032
]
B1sIIB91_00025
03400 DNA repair and recombination proteins [BR:
nab03400
]
B1sIIB91_00025
Enzymes [BR:
nab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
B1sIIB91_00025
DNA replication proteins [BR:
nab03032
]
Prokaryotic type
DNA Topoisomerases
B1sIIB91_00025
DNA repair and recombination proteins [BR:
nab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
B1sIIB91_00025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
ASY23334
UniProt:
A0A249L2W9
LinkDB
All DBs
Position
4695..6689
Genome browser
AA seq
664 aa
AA seq
DB search
MATKSSAESIKSKKEHKGYDASNITVLEGLDAVRKRPGMYIGSTGERGLHHLVYEVVDNS
VDEALAGYCTEINVILQKDGSVKVIDNGRGIPVDIHPVEKKPALEVVLTVLHAGGKFGDG
GYSVSGGLHGVGISVVNALSTDLTVEVKRDGFNWNQSYKLGVPTAPVKKGSATEESGTTV
IFWPSKEIFETTDFSYETLSARFREMAFLNKGLILTLTDDRAGHVDDKGNQLQSRYEYAG
GIIDFVKHLNLSKGETHKSIISFTGEDNKSKMSLEVAMQWNNGFSESVYTFANTINTQEG
GTHEEGFRTALTSIVNKFGEEWGYIRKKEDRLTGDDVREGLTAIVSIKIGEPQFEGQTKT
KLGNTEAKSFTQKAMNDHLTSWFEKNPSEGKDIVRKSIDAAAARVAARKARDLSRNRKGL
LEGRGMPGKLADCQWTEPEKCELYIVEGDSAGGSTKGGRDSRYQAVLPIRGKILNVEKAR
IDRVLQNNEVQALITALGTGIHDDFDVAKLRYHKIILMADADVDGQHIRTLLLTLLFRFM
KPLIENGFVYLAQPPLYKLKWGGKEPVQYAFSDKERDGFIKMGVDNGKRLPKEDGIQRFK
GLGEMPAKELWDTTMDPATRVLIKVTLEDAATADDLFSVLMGEDVELRRSFIQRNAKDVR
FLDI
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
gtggcgactaaaagtagcgcagaatcaataaagtcaaaaaaagaacataaaggttatgac
gcatcaaatatcaccgtccttgaaggattagatgcggttagaaaacgcccaggtatgtat
atcggttctactggtgagcgaggcctacaccatttagtttatgaagtagttgataactca
gttgatgaagcactagctggatattgcacagagataaatgtaattctacaaaaagatgga
tcagtaaaagtaattgataatggacgtggtattcctgtagacattcacccagttgaaaag
aaaccagcacttgaagttgtattaacagttttacatgctggtggaaaatttggtgacggc
ggctactcagtctctggcggcctacacggcgttggtatttcagttgttaatgcattaagt
actgatctaactgttgaggttaaacgcgatggatttaattggaaccaaagctataaatta
ggtgtgccaactgcgccagttaaaaaaggtagcgcgacggaggaatctggcactactgtt
attttttggccatcaaaagaaatttttgaaaccacagatttttcatatgaaacattatct
gccagattccgagaaatggcatttttaaataaaggtttaattttaactcttaccgatgat
cgagctggccacgttgacgataaaggaaatcaattacagtcgcgttatgaatatgccggc
ggaattattgattttgttaaacacttaaatttatcaaaaggtgaaacccacaaatcaatt
atttcatttacaggagaagataataaaagcaagatgtcactagaggttgcaatgcagtgg
aataatggtttttcagaatccgtttacacatttgcaaacacaattaacacccaagaaggt
ggtacacacgaagaaggttttagaacagctctcacatcaatagttaataagtttggtgaa
gagtggggatatattagaaagaaagaagatcgactaactggagatgatgttagagaagga
ttaaccgcaattgtttccatcaaaatcggcgagccacaatttgaaggacaaaccaaaaca
aaattaggaaatactgaagccaaatcctttactcaaaaagcaatgaatgaccacttaacc
tcatggtttgaaaaaaatccaagtgaaggaaaagacattgttagaaaatcaattgatgca
gcagcagctcgagttgcagctagaaaagcacgtgatttatcaagaaaccgaaaaggatta
ctggaaggacgaggcatgccaggaaagttggcagattgccaatggactgaaccagaaaag
tgcgagttatatattgttgagggagattctgcgggcggctcaactaaaggtggccgtgat
tcacgttatcaagcagtactaccaattcgtggcaagattttaaatgttgaaaaagcaaga
atcgaccgagtattacaaaataatgaagtgcaagcgctaattaccgcactcggtactggc
attcatgatgattttgacgtagcaaaacttaggtatcataaaattattttaatggccgat
gctgatgttgacgggcaacacattagaaccctgctactaactttattatttagatttatg
aaaccattaatcgaaaacggttttgtttatttagctcaaccaccgctatataaattaaag
tggggtgggaaagaaccggttcaatatgcatttagtgataaagaacgcgatggttttatt
aaaatgggagttgataacggtaaacggttaccaaaagaagatggtatccaacgatttaaa
ggattaggtgaaatgccagcgaaagaattatgggatacaactatggaccctgcaacaaga
gttttaattaaagtaaccctagaggatgcagcaactgctgatgatttattttcagtgcta
atgggtgaagatgttgagcttcgtagatcatttattcaacgcaatgctaaagatgttaga
ttcttggatatctaa
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