Candidatus Nanopelagicus abundans: B1sIIB91_00705
Help
Entry
B1sIIB91_00705 CDS
T05091
Name
(GenBank) tRNA pseudouridine38-40 synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
nab
Candidatus Nanopelagicus abundans
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nab03016
]
B1sIIB91_00705
Enzymes [BR:
nab01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
B1sIIB91_00705
Transfer RNA biogenesis [BR:
nab03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
B1sIIB91_00705
Prokaryotic type
B1sIIB91_00705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Exotox-A_bind
Motif
Other DBs
NCBI-ProteinID:
ASY23455
UniProt:
A0A249L3E0
LinkDB
All DBs
Position
132347..133189
Genome browser
AA seq
280 aa
AA seq
DB search
MTKPTLEVKSGFSRLRVDLTYQGTNFSGWAKQPNERTVQEEVEKALSMITQTKVATIVAG
RTDAGVHAKHQVIHTDLPTQTDINNLAFRLNQILDADIRVLTAQWAPDNFHARFTAISRT
YQYKIIDAGKVTAPLDRHDSTEWFRPLDIELMNSGSKLLLGAHDFFAFCKFREGGSTVKN
LITFNWHRDEKDVVICEISADSFRYNMVRNLVGAAVCVGEGRFKPEWMLDTLKNKERISD
SYVFPAKGLTLISVQYPPVEQYLSNYENYLATQENSEDEG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgactaaacccactcttgaagttaagagtgggttttctcgtttaagagttgatttaact
tatcagggtacaaatttttctggttgggcaaaacaaccaaatgagcgaactgttcaagaa
gaagtagaaaaagctttaagcatgattacccaaactaaagttgcaacaattgtggctggg
cgaactgatgctggtgtgcatgcaaaacatcaagtgattcacactgatttaccaacgcaa
actgatataaataatttagcatttagattaaatcagattttagatgcagatataagggta
ttaacggcgcagtgggcacctgataactttcatgccagatttactgctatttcgcgcacc
tatcaatacaaaataatagacgcgggcaaagtaactgcgcccctagatagacatgacagt
actgaatggtttcgcccattagatattgaattaatgaactctggttctaaactgcttcta
ggcgcgcatgatttctttgcattttgtaagtttcgtgaaggtggtagcaccgtaaagaat
ctaattacatttaattggcatcgtgatgaaaaagatgttgtaatttgtgagataagcgct
gattcttttagatataacatggttaggaatttagtaggagctgcagtctgtgttggtgaa
ggtagatttaaaccagagtggatgcttgatactttaaaaaataaggaaagaatttcagat
agttatgtatttccagcaaagggtttgactttgatttcagtgcaatatccaccagttgag
caatatttgagcaattatgagaattatttggcaacccaagagaactcagaggatgagggc
tga
DBGET
integrated database retrieval system
