Candidatus Nanopelagicus abundans: B1sIIB91_01795
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Entry
B1sIIB91_01795 CDS
T05091
Name
(GenBank) deoxyribodipyrimidine photolyase-related protein
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
nab
Candidatus Nanopelagicus abundans
Brite
KEGG Orthology (KO) [BR:
nab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nab03400
]
B1sIIB91_01795
Enzymes [BR:
nab01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
B1sIIB91_01795
DNA repair and recombination proteins [BR:
nab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
B1sIIB91_01795
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
DUF6921
Motif
Other DBs
NCBI-ProteinID:
ASY23655
UniProt:
A0A249L3Y2
LinkDB
All DBs
Position
complement(338992..340464)
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AA seq
490 aa
AA seq
DB search
MKQIIYVSHDQLNTKYGALKNADPKNDLIVLVQSDRMVTGDHWNKIRLYFLISSALHFAE
ELKDAGFTVIYQKAGTTVDGLKIVQGKYKNLPITACAPSSFRLHKSLSDFGVKFVESDFF
LTPKSLFKEWADNQKSYLMESFYRNQRVRLNILVEKGKPVGGAWNFDKENRSPLPKGYKF
PPYLDHKPDEIDIQVAKELGIKTSTTWATNRAGAKKVLKNFLDNHFKSFGPYEDAMTSDN
WALHHSLLSPYINNGLLHPSEVIDAAVKRFEKGDIPIASAEGFIRQIIGWREYVNGMYWY
LGQDYKEGNHLNAKRDLLPLFTDPDKTKMNCIKTTVSDINERAWVAHIPRLMLLSNLALI
TGTNPQQFLQWMRQVFIDASDWVMVPNVIGMGVHADNGVLMTKPYAAGGAYISKMSNYCK
GCFYDPKLRVGDNACPFTTLYWDFLDRNLEEFKGNHRMSQQLFGIGRLKDMPEVRQRAAK
VLAGLEKGEI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaaataatctatgtcagtcatgatcaattaaatacaaagtacggtgctcttaaa
aacgctgatccaaaaaatgatctaattgttttagttcaaagtgatcgaatggtcactggt
gatcattggaacaaaatacgactctattttcttatctcaagtgctcttcactttgccgaa
gagctaaaagatgctggttttacagttatctatcaaaaagctggcacgactgttgatgga
ttaaaaatagtgcaaggtaagtataagaatctgccaatcacagcctgtgcgccctcatca
tttagattacacaaatcattatctgattttggcgttaaatttgttgaaagtgatttcttt
ttaacacctaaatcattatttaaagagtgggcagataatcaaaaaagttatctaatggaa
tccttttatagaaaccaacgggtgcggctaaatattttggtagaaaaaggtaagccagta
ggtggtgcttggaactttgataaagaaaatcgctcaccacttcctaagggctacaaattt
ccgccatatttagatcacaaaccagatgagattgatattcaagttgcaaaggaattaggt
attaaaactagtactacctgggcaacaaacagagctggtgctaaaaaagtattaaaaaac
ttcctagataatcactttaaaagctttggtccttatgaggatgccatgactagtgataac
tgggcacttcatcattcactgcttagtccttatataaataacggcctacttcatccaagt
gaagtgatagatgcagccgttaaaaggtttgaaaaaggtgatattccaattgcatcagct
gaaggttttatccgccagattattggctggcgtgagtatgtaaatggaatgtattggtat
ttagggcaggattacaaagaaggtaatcatttaaatgcaaagcgtgatctcttgcctcta
tttactgatccagataaaaccaaaatgaattgcattaaaactaccgtgtcagatattaat
gagcgtgcttgggttgcccatatcccccgtctcatgctgcttagtaatttagctttaatt
actggaactaatccgcagcaatttctgcagtggatgaggcaggtatttattgatgctagt
gattgggtgatggtgccaaatgtaattgggatgggtgtgcacgcagataatggcgtgttg
atgactaagccatatgcagcaggtggggcttacatctcaaagatgagtaattactgcaaa
ggttgtttttatgatccaaagcttagagttggtgataatgcctgcccatttacaacttta
tattgggactttctagatagaaatttagaagagtttaaaggcaatcaccgaatgagtcag
caattatttggaatcggcagacttaaagatatgccagaggttaggcagcgagcagctaag
gttttagcggggttggaaaagggcgagatttaa
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